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. 2015 May 19;6(24):20084–20098. doi: 10.18632/oncotarget.3907

Table 2. Thermodynamic parameters determined for the interaction of embonic acid with human m-NAD(P)-ME.

Characteristics m-NAD(P)-ME aAverage N (sites) bKd (μM) cΔG (kcal/mol) dΔH (kcal/mol) fS (kcal/mol) eΔS (kcal/mol/deg)
WT 3.8 ± 0.2 2.7 ± 0.7 −7.6 −4.6 ± 0.3 3.0 9.9
Tetramer interface mutant H142A/D568A 1.4 ± 0.03 0.4 ± 0.1 −8.8 −12.3 ± 0.4 −3.5 −11.7
Exo site mutant (at tetramer interface) R197E 3.4 ± 0.1 1.0 ± 0.2 −8.2 −5.1 ± 0.1 3.1 10.5
Dimer interface mutant Q51A/E90A 1.8 ± 0.1 1.1 ± 0.4 −8.1 4.7 ± 0.4 12.8 42.8
Fumarate site mutant (at dimer interface) E59N 2.0 ± 0.2 3.5 ± 1.1 −7.4 −1.7 ± 0.2 5.8 19.4
R67A 1.9 ± 0.2 4.0 ± 0.7 −7.3 4.0 ± 0.2 11.4 38.1
R91A 3.7 ± 0.4 13.1 ± 3.8 −6.7 −1.7 ± 0.3 5.0 16.5
a

Average N (sites) signifies the stoichiometry of embonic acid in a tetrameric malic enzyme at equilibrium.

b

Kd (μM) represents the dissociation constant of embonic acid against m-NAD(P)-ME, which is reciprocal of KA (association constant).

c

ΔG (kcal/mol)

d

ΔH (kcal/mol) and

e

ΔS (kcal/mol/deg) represent the free energy change during the binding process.

f

T was fixed at 298K.