Table 2.
Profiling of miRNAs in human breast cancer cell lines by miScript miRNA PCR Array. Subgroups of cell lines are compared
miRNA (p < 0.05) | SUM1315-LXSN / SUM1315-BRCA1 | Basal BRCA1+/ Luminal | Basal BRCA1- / Luminal | Tumoral / Benign | Basal BRCA1- / Benign | Basal BRCA1+ / Benign |
---|---|---|---|---|---|---|
Over-Expressed (Fold change >2) | hsa-miR-206 | hsa-miR-10b | hsa-miR-26a | hsa-miR-485-5p | hsa-miR-485-5p | hsa-miR-100 |
hsa-miR-10b | hsa-miR-100 | hsa-miR-148a | ||||
hsa-miR-129-5p | hsa-miR-26a | hsa-miR-328 | ||||
hsa-miR-607 | ||||||
Under-Expressed (Fold change <0.5) | hsa-miR-16 | hsa-let-7e | hsa-miR-15b | hsa-let-7b | hsa-let-7f | hsa-miR-125b |
hsa-miR-31 | hsa-miR-19a | hsa-miR-328 | hsa-let-7f | hsa-miR-140-5p | hsa-miR-128 | |
hsa-miR-203 | hsa-miR-206 | hsa-miR-485-5p | hsa-miR-140-5p | hsa-miR-155 | hsa-miR-155 | |
hsa-miR-328 | hsa-miR-429 | hsa-miR-489 | hsa-miR-155 | hsa-miR-15b | hsa-miR-193b | |
hsa-miR-607 | hsa-miR-485-5p | hsa-miR-548c-3p | hsa-miR-193b | hsa-miR-210 | hsa-miR-195 | |
hsa-miR-613 | hsa-miR-497 | hsa-miR-26a | hsa-miR-25 | hsa-miR-199b-3p | ||
hsa-miR-26b | hsa-miR-26a | hsa-miR-199a-5p | ||||
hsa-miR-29c | hsa-miR-26b | hsa-miR-19a | ||||
hsa-miR-27a | hsa-miR-205 | |||||
hsa-miR-29c | hsa-miR-206 | |||||
hsa-miR-489 | hsa-miR-20a | |||||
hsa-miR-495 | hsa-miR-214 | |||||
hsa-miR-25 | ||||||
hsa-miR-26a | ||||||
hsa-miR-26b | ||||||
hsa-miR-27a | ||||||
hsa-miR-29a |
Bold entries are miRNAs that were found to be differently expressed in at least two subgroups by PCR Array