Table 4.

Nucleotide content and gene count levels of the genome

Attribute	Value	% of total
Genome size (bp)	3,607,052	100.00
DNA coding (bp)	3,268,621	89.99
DNA G+C (bp)	1,715,377	47.56
DNA scaffolds	7	100.00
Total genes	3427	100.00
Protein coding genes	3296	96.18
RNA genes	131	3.82
Pseudo genes	24	0.70
Genes in internal clusters	2431	70.94
Genes with function prediction	2571	75.02
Genes assigned to COGs	2797	81.62
Genes with Pfam domains	2916	85.09
Genes with signal peptides	273	7.97
Genes with transmembrane helices	755	22.03
CRISPR repeats	1	–

The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome