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. 2015 Nov 20;46:136. doi: 10.1186/s13567-015-0279-8

Table 5.

List of SNPs ralated to disorders of nucleotide excision repair.

Transcript_id KEGG GENE NAME Site Ref CS_type TS_type
comp74141_c0_seq1 ERCC1 2223 G A
comp74141_c0_seq2 2070 G A
comp74141_c0_seq2 847 G T T
comp88233_c0_seq1 ERCC2 128 G A
comp88233_c0_seq1 2140 T C
comp88233_c0_seq1 2450 G T
comp108677_c0_seq1 CCNH 190 C T
comp61358_c0_seq1 Cul4A 1710 A C
comp61358_c0_seq1 871 C A
comp71102_c0_seq1 Cul4B 1738 A G
comp71102_c0_seq1 811 A G
comp32714_c0_seq1 DDB1 129 G A
comp32717_c0_seq1 1429 G A
comp32717_c0_seq1 433 T C
comp32741_c0_seq1 1157 G C C
comp80349_c0_seq1 LIG1 3623 C T
comp90786_c1_seq5 PCNA 105 T C C
comp90786_c1_seq5 13 G A
comp90786_c1_seq5 1314 G A
comp90786_c1_seq5 1683 A G
comp90786_c1_seq5 1934 G A A
comp90786_c1_seq5 2038 A G
comp90786_c1_seq5 2068 A G G
comp90786_c1_seq5 22 A G
comp90786_c1_seq5 2395 A G
comp90786_c1_seq5 2465 G A
comp90786_c1_seq5 2487 G A A
comp90786_c1_seq5 2501 A G
comp90786_c1_seq5 2543 G A
comp90786_c1_seq5 2562 A G
comp90786_c1_seq5 93 G C
comp90786_c1_seq7 PCNA 105 T C C
comp90786_c1_seq7 1240 T C C
comp90786_c1_seq7 1244 C A A
comp90786_c1_seq7 13 G A
comp90786_c1_seq7 1818 G A A
comp90786_c1_seq7 2077 A C C
comp90786_c1_seq7 22 A G
comp90786_c1_seq7 2401 A G
comp90786_c1_seq7 2615 C G
comp90786_c1_seq7 93 G C
comp33042_c0_seq1 RBX1 89 G T
comp89984_c0_seq1 RPA 1679 C T
comp89984_c0_seq1 1829 G A
comp89984_c0_seq1 2071 G A
comp89984_c0_seq1 2600 C G
comp89984_c0_seq1 2645 G T
comp89984_c0_seq1 3312 A G
comp89984_c0_seq1 799 C T
comp89984_c0_seq1 815 G T
comp33075_c0_seq1 RPA2 100 T C C
comp57325_c0_seq1 RPA12 385 G C
comp59041_c0_seq1 RPA49 757 G A
comp59041_c0_seq1 864 A G
comp59044_c0_seq1 380 G C
comp72565_c0_seq1 RPA3 475 A G
comp72565_c0_seq1 802 G A
comp88203_c0_seq2 RPA 4663 G C
comp81979_c0_seq1 RPA43 1011 C T
comp81979_c0_seq1 1032 C T
comp81979_c0_seq1 1098 G A
comp56791_c0_seq1 RFC1 3527 T C C
comp56791_c0_seq1 3757 A G
comp36422_c0_seq1 RFC2 1188 C T
comp85228_c0_seq1 RFC2 1319 T G
comp85228_c0_seq1 1744 A C
comp85228_c0_seq1 1844 C T
comp36017_c0_seq1 RFC3 335 A C C
comp37382_c0_seq1 RFC3 49 C T
comp82958_c1_seq1 TFIIH2 122 G A
comp57951_c0_seq1 TTDA 513 G T
comp91081_c0_seq1 XPA 1705 T C
comp91081_c0_seq3 1633 T G
comp91081_c0_seq3 2827 A T
comp91081_c0_seq4 2669 A T
comp91081_c0_seq4 2893 C A A

The identical bases with reference sequences were indicated with “–”.