Table 4.
Haplotype frequencies of GABRP SNPs in SLE patients and healthy controls.
| Haplotype | Frequencya | Chi-square | P b | |||||
|---|---|---|---|---|---|---|---|---|
| rs929763 | rs732157 | rs2303134 | rs1063310 | rs3805455 | Control | SLE | ||
| T | C | A | C | C | 0.406 | 0.345 | 3.580 | 0.03 |
| A | C | A | C | C | 0.228 | 0.220 | 0.091 | 0.803 |
| A | T | A | A | T | 0.223 | 0.185 | 1.942 | 0.166 |
| A | C | A | A | T | 0.037 | 0.057 | 2.516 | 0.334 |
| T | C | A | A | T | 0.044 | 0.026 | 1.893 | 0.431 |
| A | C | A | C | T | 6.4E − 4 | 0.105 | 102.6 | 4.2E − 24 |
| Other | 0.062 | 0.062 | — | — | ||||
aValues were constructed by EM algorithm with genotyped SNPs.
bValues were analyzed by permutation test or Chi-square.