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. 2015 Nov 23;3:54. doi: 10.1186/s40168-015-0119-0

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© Shirey et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Stacked histograms illustrating phylum-level bacterial composition of the 14 stool samples. Ion Torrent 16S rRNA gene sequence reads were assigned to representative taxonomy by alignment with Greengenes ribosomal database using an OTU definition of 97 % sequence homology or greater with a minimum cluster size of 3