Table 5.
Diapause genes identified from all three references
| Gene Name | No. of Dataa | Diapause versus | |
|---|---|---|---|
| pre-Diapause | post-Diapause | ||
| Dual specificity phosphatase 27 (dusp27) | 12 | UPb (2.7) | UP (2.1) |
| Kelch-like family member 38 (klhl38) | 12 | UP (4.8) | UP (2.4) |
| Sequestosome 1 (sqstml) | 9 | UP (2.1) | UP (2.5) |
| Collagen a-1(IX) chain-like (col9a1) | 15 | DOWNc (−2.2) | DOWN (−2.6) |
| Dentin sialophosphoprotein-like (dspp) | 12 | DOWN (−2.3) | DOWN (−2.3) |
| Formin-like protein (fmnll) | 9 | DOWN (−2.8) | DOWN (−3.0) |
| Transmembrane 4 L6 family member 5-like (tm4sf1) | 9 | UP (1.6) | DOWN (−3.1) |
| Arginase-2-like (arg2) | 15 | UP (2.9) | − d |
| Rhesus glycoprotein (rhcg) | 12 | UP (3.7) | - |
| Elastase-1-like (celal) | 9 | UP (2.5) | - |
| Interleukin-12 subunit b-like (il12b) | 9 | - | UP (3.5) |
| Galactose-specific lectin nattectin-like (ctl) | 15 | DOWN (−3.9) | UP (3.2) |
| Egl-9 family hypoxia-inducible factor 3 (egln3) | 12 | DOWN (−2.5) | - |
| Hemoglobin subunit b-like (hbb) | 9 | DOWN (−3.6) | - |
| a-Tectorin-like (tecta) | 78 | - | DOWN (−4.6) |
| Mucin-2-like (muc2) | 39 | - | DOWN (−2.8) |
| Cartilage intermediate layer protein 2-like (clip2) | 27 | - | DOWN (−2.1) |
| GATA zinc finger domain-containing protein 14-like (muc5ac) | 24 | - | DOWN (−2.7) |
| Natterin-3-like | 24 | - | DOWN (−4.6) |
| Interferon-inducible GTPase 5-like (irgm) | 21 | - | DOWN (−3.4) |
| CUB and zona pellucida-like domain-containing protein 1-like (zpldl) | 18 | - | DOWN (−4.2) |
| Sperm acrosome membrane-associated protein 4-like (spaca4) | 15 | - | DOWN (−3.3) |
| Neoverrucotoxin subunit a-like (neovtx) | 12 | - | DOWN (−4.5) |
| Cytolysin RTX-S-2-like (rtx-s II) | 9 | - | DOWN (−3.7) |
| Cytoskeleton-associated protein 4 (ckap4) | 9 | - | DOWN (−3.3) |
| Seminal plasma glycoprotein 120 (spp120/bsph1) | 9 | - | DOWN (−4.1) |
| Retinol binding protein 2 (rbp2) | 9 | - | DOWN (−2.2) |
aNo. of Data are from three diapause replicates and three genome/transcriptome references (RPKM and fold change data are listed in the Supplementary document);
bAVERAGE(Log2(FoldChange)) ≥ 1.5;
cAVERAGE(Log2(FoldChange))≤−1.5;
d-1.5 < AVERAGE(Log2(FoldChange)) < 1.5