Table 1. Summary of Illumina sequencing and transcriptome assembly.
Condition | Sample name | Raw reads | Clean reads | Clean bases (bp) | Valid rate (%) | Q30 (%) | GC content (%) |
---|---|---|---|---|---|---|---|
Blue light | B1 | 41550778 | 41229474 | 5140724575 | 98.97 | 94.23 | 53.00 |
Blue light | B2 | 55086542 | 54601944 | 6810865040 | 98.88 | 93.86 | 53.00 |
Blue light | B3 | 43980608 | 43620184 | 5437497814 | 98.90 | 94.00 | 53.00 |
White light | W1 | 42935054 | 42523434 | 5298145890 | 98.71 | 93.79 | 55.00 |
White light | W2 | 33365916 | 33090892 | 4132171509 | 99.07 | 93.2 | 54.00 |
White light | W3 | 42670976 | 42283004 | 5258718979 | 98.59 | 92.07 | 55.00 |