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. 2015 Nov 24;10(11):e0134649. doi: 10.1371/journal.pone.0134649

Table 3. Fixed-effect meta-analysis results (P<2.0x10-3) for significant signals of association (5.00x10-6) from IRASFS.

SNP Chr:Position (hg19) Alleles b Effect SE Weight Zscore Direction f Gene Name P-value
Waist Circumference (WAIST) a
rs1471880 4:113546107 A/C 0.0221 0.005 +++-++- ZGRF1 8.38E-06 d
rs6435435 2:209112551 A/G 0.0307 0.0077 +-++-++ IDH1 6.74E-05 d
rs13144672 4:113472958 A/G -0.0131 0.0033 ---+--+ ZGRF1 6.90E-05 c
rs7696816 4:113539969 A/G -0.0126 0.0033 ---+--+ ZGRF1 1.01E-04 c
rs12054518 4:113549989 A/G 0.0125 0.0033 +++-++- ZGRF1 1.24E-04 c
rs1869479 11:44343856 A/C 0.0176 0.0047 +-+-++- HSD17B12/CD82 2.01E-04 d
rs6734788 2:209093069 A/G -0.0194 0.0058 -+-++++ CCNYL1/IDH1 7.98E-04 c
rs7937515 11:71841325 A/G 0.0141 0.0046 +-+-++- FAM86C1/FOLR3 2.00E-03 c
Waist-Hip Ratio (WHR) a
rs7696816 4:113539969 A/G -0.0116 0.0028 ---++-- ZGRF1 4.34E-05 e
rs13106629 4:113459416 A/G 0.0116 0.0028 +++--++ C4orf32/ZGRF1 4.39E-05 e
rs12054518 4:113549989 A/G 0.0115 0.0028 +++--++ ZGRF1 5.43E-05 e
rs2129405 4:113447137 A/G 0.0113 0.0028 +++--++ C4orf32/ZGRF1 6.24E-05 e
rs10770244 12:17848331 A/G -0.0091 0.0023 ---++-+ MIR3974/Y_RNA 6.67E-05 d
rs13144672 4:113472958 A/G -0.0111 0.0028 ---++-- ZGRF1 7.22E-05 e
rs6734788 2:209093069 A/G -0.0109 0.0028 -+-++-+ CCNYL1/IDH1 9.02E-05 c

aMeta-analysis was computed based on beta and SE

b Reference/alternate allele

cAdditive model

dDominant model

eRecessive model

fDirection follows as: IRASFS, IRAS, BetaGene, TRIPOD, HTN-IR, MACAD, NIDDM-Athero