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. 2015 Nov 26;5:17190. doi: 10.1038/srep17190

Figure 3. Phylogenetic affiliation of the abundant bacterial OTUs associated with the eastern larch beetle based on partial 16S rRNA gene sequences.

Figure 3

Closely related sequences were identified using BLASTN against NCBI database. Sequences were aligned using the MUSCLE algorithm implemented in Geneious. Maximum phylogenetic tree was constructed with FastTree using the GTR model with 1,000 resampling. The colors used for the OTUs represent the environment they belong to (blue = ectomicrobiome, orange = microbiome of the galleries, green = endomicrobiome, * = presence in ectomicrobiome and galleries and + = presence in endomicrobiome and galleries).