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. 2015 Oct 27;2015(1):289–303. doi: 10.1093/emph/eov026

Table 1.

Samples sequenced in this study

Sample no. Virus Isolate reference Origin Date collected Accession no.
1 SVDV BUL/2/71 Plovdiv, Bulgaria 1971 KT284979
3 SVDV GRE/1/79 Greece July 1979 KT284980
6 SVDV UKG/308/73 Farm H, Heaton Moor, Stockport, Gtr. Manchester, UK 30 October 1973 KT284981
8 SVDV USS/6/72 Odessa region, Ukraine, USSR 1972 KT284982
10 SVDV HKN/1/80 Tai Shui Hang, Lantau Island, Hong Kong 1 February 1979 KT284983
11 SVDV HKN/7/81 Bing Kong, Sheung Shui, N.T., Hong Kong 6 January 1981 KT284984
12 SVDV HKN/1/82 Shek Kong, Kam Tin, N.T., Hong Kong 2 April 1981 KT284985
13 SVDV HKN/5/85 Ping Che, Ta Kwu Ling, Fanling, N.T., Hong Kong 28 December 1984 KT284986
14 SVDV HKN/19/85 Mong Tseng Tsuen, Ping Shan, Y.L., N.T., Hong Kong 3 July 1985 KT284987
15 SVDV HKN/12/87 Ma Tso Lung, Sheung Shui, N.T., Hong Kong 25 March 1987 KT284988
16 SVDV MTA/22/75 Rabat, Zebbug, Malta 20 August 1975 KT284989
17 SVDV ITL/A/89 Campodoro, Padova, Veneto, Italy 23 December 1988 KT284990
18 SVDV ITL/1/91 Messina, Sicily, Italy 30.January 1991 KT284991
19 SVDV ITL/2/91 Agerola, Naples, Campania, Italy 15 April 1991 KT284992
21 SVDV ITL/16/2006 Offlaga, Brescia, Lombardy, Italy 1 December 2006 KT284993
22 SVDV AUR/1/73 Wiener Neustadt, Austria December 1972 KT284994
23 SVDV POL/1/73 Yaslo District, Poland 13 December 1972 KT284995
24a SVDV HKN/19/70 Kwan Tei, Fanling, N.T., Hong Kong 9 March 1970 KT284996
25 SVDV ITL/1/66 Lombardy, Italy October 1966 KT284997
26 SVDV HKN/36/71 Shui Tsan Tin, Pat Heung, Y.L., Hong Kong 29 April 1971 KT284998
28 SVDV FRA/1/73 Bordeaux, France January 1973 KT284999
29 SVDV HKN/11/72 Ngau Tam Mei, Sun Tin, N.T., Hong Kong 29 February 1972 KT285000
31 SVDV HKN/3/91 Fung Kut Heung, Kam Tin, Y.L., N.T., Hong Kong 6 July 1991 KT285001
32 SVDV HKN/4/89 Ki Lun Shan, San Tin, Y.L., N.T., Hong Kong 19 March 1989 KT285002
33 SVDV TAW/119/97 Kaoshiung, Taiwan POC 18 December 1997 KT285003
36 SVDV ITL/3/73 Latina, Lazio, Italy November 1972 KT285004
37 SVDV ITL/5/77 Mantova, Lombardy, Italy 3 October 1977 KT285005
40 CV-B5 2137/70 Wisconsin, USA 1970 KT285006
41 CV-B5 4469/72 Georgia, USA 1972 KT285007
42 CV-B5 9030/77 Idaho, USA 1977 KT285008
43 CV-B5 4634/83 Alabama, USA 1983 KT285009
44 CV-B5 9954 Birmingham, UK 1973 KT285010
45 CV-B5 8068 Birmingham, UK 1973 KT285011
46 CV-B5 1603/Finland/82 Finland 1982 KT285012
48 CV-B5 93083-3/Taiwan/83 Taiwan 1983 KT285013
49 CV-B5 028/Pakistan/91 Pakistan 1991 KT285014
50 CV-B5 93-17428/France/93 France 1993 KT285015
51 CV-B5 84-6500/France/84 France 1984 KT285016
53 CV-B5 4267/Cambridge/92 Cambridge, UK 1992 KT285017
54 CV-B5 HONGKONG Hong Kong c. 1972 KT285018
a

This sample was sequenced on the Illumina MiSeq platform, all other samples were sequenced on the Illumina HiSeq platform (see ‘Methodology’ section).