Table 1. Hodgkin similarity indices calculated for E. coli TS, W.g.b. TS and their mutants modeled using the E. coli TS structure (PDB ID 2G8O) as a template.
E. coli | E. coli_2K* | E. coli_4K† | W.g.b | W.g.b_mut‡ | |
---|---|---|---|---|---|
E. coli | 1 | 0.819 | 0.052 | −0.387 | 0.454 |
E. coli_2K* | 0.819 | 1 | 0.192 | −0.151 | 0.568 |
E. coli_4K† | 0.052 | 0.192 | 1 | 0.731 | 0.532 |
W.g.b | −0.387 | −0.151 | 0.731 | 1 | 0.325 |
W.g.b_mut‡ | 0.454 | 0.568 | 0.532 | 0.325 | 1 |
*E. coli_2K: double mutant, G23K/E86K.
†E. coli_4K: quadruple mutant, G23K/E82K/E86K/G257K.
‡W.g.b_mut: W.g.b. TS with four lysines mutated to the corresponding E. coli residues, K23G/K82E/K86E/K257G.