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. 2015 Nov 27;16:265. doi: 10.1186/s13059-015-0821-z

Fig. 5.

Fig. 5

a Comparison of bacteria identified from three samples profiled by the HMP. b Comparison of bacteria identified from two lung sputa samples of cystic fibrosis patients. Both MetaPhlAn and Kraken and the procedure outlined in this study identify a consistent set of microbial species in the five samples (cosine similarity >0.95). Values represent percentage of bacteria reads found in each sample