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. 2015 Nov 27;8:728. doi: 10.1186/s13104-015-1687-6

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© Mohammed and Cormican. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Complete genome alignment of different S. Typhimurium phage types generated using BRIG [44]. S. Typhimurium strain LT2 (DT4) genome is used as a reference and its four associated prophages (Fels-1, Fels-2, Gifsy-1 and Gifsy-2) and the phage remnant are also included in the alignment. The draft genome of both DT8 and DT30 variants harbours Gifsy-2 and the phage remnant but lacks Gifsy-1, Fels-1 and Fels-2