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. 2015 Nov 26;16:1012. doi: 10.1186/s12864-015-2226-5

Table 5.

Change in expression of unigenes encoding transcription factors based on Pfam database annotation

Pfam description Unigene ID Fold ratio (MWL/CON) Fold ratio (SWL/CON) Fold ratio (REH/CON)
Sigma-70 region 2/PDZ domain comp19121_c0 10.253 (+) 6.0771 (+) 2.4975 (+)
MerR family regulatory protein comp14862_c0 17.136 (+) 19.208 (+) 2.9717 (+)
Zinc finger, C2H2 type comp15972_c0 21.736 (+) 20.636 (+) 9.1286 (+)
bZIP comp15892_c0 358.24 (+) 183.78 (+) 40.496 (+)
comp18331_c0 -3.1832 (-) -2.6807 (-) -3.1844 (-)
comp15544_c1 4.3884 (+) 3.5527 (+) 2.7953 (+)
comp13101_c0 26.959 27.171 (+) 2.7079
comp7214_c0 5.1910 6.1292 (+) 2.7562
comp93507_c0 28.770 61.996 (+) 1.4304
comp11150_c0 -20.696 (-) -5.2427 -3.0823
comp18079_c0 -16.651 (-) -4.8885 -4.9664
comp11771_c0 1.4930 1.6420 -2.7064 (-)
comp12977_c0 1.2026 1.5545 2.0757 (+)
AP2 domain comp11814_c0 -2.5254 -3.0625 (-) 1.0713
Homeobox-associated leucine zipper comp23316_c0 2.0326 2.6365 3.4000 (+)
comp15332_c0 4.4661 3.8530 (+) -1.0889
comp17307_c0 3.3889 (+) 1.7018 -1.0460
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B comp17988_c0 1.7127 2.7391 (+) 2.2202
Sigma-70 region 3 comp16574_c0 4.4540 2.8341(+) 2.4441 (+)
Sigma-70 region 2 comp18383_c0 -2.8631(-) -1.7289 -1.3105

“(+)” indicates significantly upregulated expression; “(-)” indicates significantly downregulated expression