Table 8. Closest species of 16S rRNA sequence similarities from bacterial strains isolated from pig large-intestine.
| Strain | Closest species | Accession no. | Similarity (%) | Length (bp) |
|---|---|---|---|---|
| J49 | Bacterium | GQ165512 | 99 | 1479 |
| H1 | Citrobacter freundii | FJ768455 | 99 | 1549 |
| 11 | Citrobacter freundii | DQ294288 | 99 | 1534 |
| 6 | Citrobacter freundii | DQ444289 | 99 | 1534 |
| 7 | Citrobacter freundii | DQ294285 | 99 | 1534 |
| CDC 621-64 | Citrobacter freundii | AF025365 | 99 | 1523 |
| JCM 24061 | Citrobacter freundii | AB548826 | 99 | 1497 |
| KWB09-600 | Escherichia albertii | HM194877 | 99 | 1501 |
| SYW001 | Escherichia coli | EF620921 | 99 | 1505 |
| PGB 01 | Escherichia coli | HM486679 | 99 | 1506 |
| Y38 | Escherichia coli | JN578647 | 99 | 1538 |
| MMG 3b | Escherichia coli | JN162443 | 99 | 1483 |
| 131 | Escherichia coli | JN180964 | 99 | 1505 |
| C2 | Escherichia coli | AF403733 | 99 | 1507 |
| Acj 212 | Escherichia coli | AB480776 | 99 | 1508 |
| Y31 | Escherichia coli | JN578646 | 98 | 1538 |
| No22 | Escherichia coli | AB604197 | 98 | 1511 |
| SSCT59 | Gamma proteobacterium | AB210976 | 99 | 1500 |
| SSCT62 | Gamma proteobacterium | AB210973 | 99 | 1506 |
| 319 | Klebsiella pneumoniae | AB513734 | 99 | 1501 |
| 211 | Klebsiella pneumoniae | GQ259887 | 99 | 1503 |
| T89 | Klebsiella pneumoniae | HQ407264 | 99 | 1522 |
| D3S | Klebsiella sp. | GU259534 | 99 | 1533 |
| C109 | Klebsiella variicola | HQ407284 | 99 | 1548 |
| 5216-70 | Shigella boydii | AY696668 | 98 | 1499 |
| FBD015 | Shigella dysenteriae | EU009186 | 98 | 1542 |
| FBD014 | Shigella dysenteriae | EU009185 | 98 | 1542 |
| FBD002 | Shigella flexneri | EU009187 | 99 | 1542 |
| E58 | Shigella flexneri | HQ407235 | 99 | 1523 |
| E55 | Shigella flexneri | HQ407232 | 99 | 1506 |
| E52 | Shigella flexneri | HQ407229 | 99 | 1525 |
| AU65 | Shigellasonnei | EF032687 | 99 | 1505 |