Table 1. Primer sequences for LAMP used and their target regions for eight meat species.
Scientific name | Sequences (5’ to 3’) | Accession No. | Target regions | ||
---|---|---|---|---|---|
Bos taurus | Cattle | FIP | TCCAGCTACAATAGATGCTCCGACACATAACTGTGCTGTCAT | AY526085 | D-loop |
BIP | GCATCTTGAGCACCAGCATAAAGTGGTGGTAGATATTTAAGGG | AY676864 | (Displacement loop) | ||
LF | ATAGCTGAGTCCAAGCATCC | DQ124417 | |||
LB | CAGTCAATGGTCACAGGACA | JN817306 | |||
F3 | GCTAATCAGCCCATGCTC | NC006853 | |||
B3 | TTGACTTTGTTTGGAGTGCT | ||||
Sus scrofa domestica | Pig | FIP | AGGGATGGGACGGCTCATGACAATCGAGTTGTTCTACCA | KC469586 | COII |
BIP | ACAGATGCTATCCCAGGACGATCTGAGCACTGTCCGTAA | KC469587 | (Cytochrome oxidase subunit II) | ||
LF | GCAGTACGTCTTCAGAGGATAC | NC012095 | |||
LB | CTCTAATATCCACACGACCTGG | AP003428 | |||
F3 | AGACTATGAAGACCTCACCTT | ||||
B3 | AGTGCTGACTAGCTTCTCA | ||||
Equus caballus | Horse | FIP | CGTGGGTTTGGTGGGTCATTATTCGCAGTAGCTATAATCCAAG | AY584828 | ATP synthase F0 subunit 6 |
BIP | CCCAGCCCATGACCACTTACACATGGCTAGTCCTGATGT | EF597513 | |||
LF | GGCTTACCAGGAGAGTGAATAC | EU939445 | |||
LB | CCCTATCAGCCCTCCTGA | FJ718997 | |||
F3 | ACACCTCCTAATACACCTCAT | NC001640 | |||
B3 | TCGGATGATGTCTCGTCA | ||||
Capra hircus | Goat | FIP | TGTTGGCGTTTGTGTGGGTATACAGACATGCCAACAACC | GU068049 | D-loop |
BIP | CACACAATGTTACGCGTATGCAGTCCGCGTTATATGGATGTTA | GU229280 | |||
LF | TTGGGTTAGGATTGGGATGTTT | GU229281 | |||
LB | AGTACATTACACCGCTCGC | GU295658 | |||
F3 | AACACAAACTTCCCACTCC | NC005044 | |||
B3 | GCTGGATTAGTACTGCATATGT | ||||
Ovis aries | Sheep | FIP | GGGAGTGTTAAGTGGGTTTGCTTAGTACTATTCACGCCTGACT | HM236179 | Cyt b |
BIP | CCATACATCAAAGCAACGGAGCAGGTCGGCTACTAGGATTC | HM236175 | (Cytochrome b) | ||
LF | TTGTCTGGGTCTCCGAGT | HM236183 | |||
LB | TTCCGACCAATCAGTCAATGT | NC001941 | |||
F3 | CTACTAATCCTCATCCTCATGC | HM236185 | |||
B3 | CCTCCAATTCATGTGAGTGT | AY858379 | |||
Gallus gallus | Chicken | FIP | GGCTGGAAGAAGGAGTGATGGCCTGAACCTGACCATGAAC | AP003323 | ATP synthase F0 subunit 8 |
BIP | ACTTCCATCACCAGGAAACCGATCAGAGTTGGATGGTGGA | AP003580 | ATP synthase F0 subunit 6 | ||
LF | CTTGAGAATTGGTCGAAGAAGC | AY235570 | |||
LB | TGGATCAACAACCGCCTC | AY235571 | |||
F3 | CCATGATTCTCCATCATACTCC | NC001323 | |||
B3 | AGGATAAGTGAGGTGAGTAGG | ||||
Anas platyrhynchos | Duck | FIP | GGTTGCCTGCTAGAGGTGGACCATCATTCCTCCTTCTACT | EU009397 | COI |
BIP | CCTCAGTGGACCTGGCTATCTGAAGTTAATGGCTCCGAGG | EU755252 | (Cytochrome oxidase subunit I) | ||
LF | CCTCATCCACTGTAGAAGCTG | EU755253 | |||
LB | CTCACTTCACCTGGCTGG | FJ167857 | |||
F3 | TTCGGCAACTGATTGGTC | NC009684 | |||
B3 | CATCCTGCTCCTCCTATCA | ||||
Meleagris gallopavo | Turkey | FIP | AATCGTCCTGGGATTGCATCTGGCTGACGATGTATTACACTCA | EF153719 | D-loop |
BIP | ACCAGGAGTGTTCTACGGACAGGATTCTACTACGATAGGCATG | JF275060 | |||
LF | ACTCCGAGGGTTGGTACA | NC010195 | |||
LB | GCGGAGCTAACCACAGTT | ||||
F3 | AGTTGACCACCGTATAGTAGT | ||||
B3 | AGGCTAGTGCTGATTCCA |