Skip to main content
. 2015 Nov 27;6:338. doi: 10.3389/fgene.2015.00338

Table 2.

Table summarizing the proportion of called variants in publicly available data that fall in the abnormal regions identified in the current study.

Total LQ LC Combined (LQLC)
% of genome 13.85% 26.6% 33.07%
% of coding region 13.89% 17.72% 26.37%
dbSNP variantsa 52,634,111 19,121,760 (36.33%) 15,483,445 (29.42%) 27,009,232 (51.3%)
CNVRsb 3,118 1,081 (34.66%) 1,706 (54.71%) 2,692 (86.3%)
RNA-seq genesc (intersecting bases) 41,788,900 11,155,280 (26.69%) 11,360,980 (27.19%) 17,959,798 (42.98%)

aData from dbSNP database (Sherry et al., 2001).

bData from Paudel et al. (2013).

cData from Ensembl (Cunningham et al., 2015).