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. Author manuscript; available in PMC: 2016 Dec 1.
Published in final edited form as: Hear Res. 2015 May 27;330(0 0):78–89. doi: 10.1016/j.heares.2015.04.010

Table 5. Cellular processes associated with the stable genes.

Terms P Value Genes
Translation 0.0003 Mrpl2, Brf1, Rpl36, Rpl27, Rps15a, Rps3, Ighmbp2, Mrps18c, Mrpl14, Eif3h, Ncoa5, Nars2, Rpl9, Rps12, Fau, Rpl37a, Rps11, Rps20, Eif2b3, Mars
Protein transport 0.0005 Vps29, Pacs1, Sec24b, Chmp4c, Rab5c, Rasl2-9, Use1, Tomm7, Rab11b, Exoc4, Cep290, Exoc3, Dopey2, Sec22c, Snap23, Appbp2, Ap2m1, Sys1, Txnip, Rrbp1, Snupn, Rab4a, Vti1b, Vps41, Stxbp4, Ywhag, Cadps2, Rab5a, Slc15a4, Mrpl45, Stx5a
Establishment of protein localization 0.0005 Vps29, Pacs1, Sec24b, Chmp4c, Rab5c, Rasl2-9, Use1, Tomm7, Rab11b, Exoc4, Cep290, Exoc3, Dopey2, Sec22c, Snap23, Appbp2, Ap2m1, Sys1, Txnip, Rrbp1, Snupn, Rab4a, Vti1b, Vps41, Stxbp4, Ywhag, Cadps2, Rab5a, Slc15a4, Mrpl45, Stx5a
Protein localization 0.0012 Vps29, Pacs1, Sec24b, Chmp4c, Rab5c, Tln2, Rasl2-9, Use1, Akap10,Tomm7, Rab11b, Exoc4, Cep290, Exoc3, Dopey2, Sec22c, Snap23, Appbp2, Ap2m1, Sys1, Txnip, Rrbp1, Snupn, Rab4a, Vti1b, Vps41, Stxbp4, Ywhag, Cadps2, Rab5a, Slc15a4, Mrpl45, Stx5a
Protein polymerization 0.0025 Gm6682, Ang, Tubb5, Tubg1, Gas7, Tuba1b
Cell cycle phase 0.0058 Ppp2r3a, Rasl2-9, Anapc10, Sirt2, Nde1, Sycp3, Ccnd2, Rsph1, Psmc3ip, Cdc123, Tubb5, Zfp830, Camk2b, Tubg1, Gadd45a, Nek6, Tfdp1
Mitotic cell cycle 0.0061 Ppp2r3a, Rasl2-9, Anapc10, Sirt2, Nde1, Sycp3, Ccnd2, Cdc123, Zfp830, Camk2b, Tubg1, Gadd45a, Nek6, Tfdp1
Interphase of mitotic cell cycle 0.0062 Ppp2r3a, Ccnd2, Cdc123, Camk2b, Gadd45a, Tfdp1
Interphase 0.0073 Ppp2r3a, Ccnd2, Cdc123, Camk2b, Gadd45a, Tfdp1
Intracellular transport 0.0081 Pacs1, Vps29, Txnip, Sec24b, Htatip2, Kif5b, Snupn, Rasl2-9, Use1, Vti1b, Vps41, Stxbp4, Nde1, Ywhag, Tomm7, Appbp2, Ehd1, Mrpl45, Stx5a, Ap2m1
Transcription, DNA-dependent 0.0091 Phrf1, Polr2f, Brf1, Ptrf, Ang, Thrap3, Gtf2h3, Lipe, Mars
RNA biosynthetic process 0.0110 Phrf1, Polr2f, Brf1, Ptrf, Ang, Thrap3, Gtf2h3, Lipe, Mars
Cell cycle 0.0123 Gas2l3, S100a6, Ppp2r3a, Rasl2-9, Anapc10, Bccip, Nde1, Cdkn2c, Rsph1, Psmc3ip, Cdc123, Tubb5, Camk2b, Zfp830, Tubg1, Tfdp1, Txnip, Sirt2, Sycp3, Mapk6, Ccnd2, Mapk3, Cdk20, Gadd45a, Nek6
Cell cycle process 0.0141 Gas2l3, Ppp2r3a, Rasl2-9, Anapc10, Sirt2, Nde1, Sycp3, Ccnd2, Rsph1, Psmc3ip, Cdc123, Tubb5, Zfp830, Camk2b, Tubg1, Gadd45a, Nek6, Tfdp1
Cellular macromolecular complex subunit organization 0.0151 Gm6682, Hist1h2be, Mbd2, Gas7, Tarbp2, Ptrf, Tbca, Ang, Tubb5, Celf2, Tubg1, Tuba1b, Smarca4
Cellular protein complex assembly 0.0152 Gm6682, Ang, Tbca, Tubb5, Tubg1, Mbd2, Gas7, Tuba1b
Cellular macromolecular complex assembly 0.0156 Tarbp2, Gm6682, Hist1h2be, Ang, Tbca, Tubb5, Celf2, Tubg1, Mbd2, Gas7, Tuba1b, Smarca4
Macromolecular complex assembly 0.0167 Gm6682, Brf1, Hist1h2be, Mbd2, Gas7, Ighmbp2, Tarbp2, Ptrf, Tbca, Ang, Tubb5, Celf2, Tubg1, Tuba1b, Lipe, Smarca4
RNA processing 0.0185 Phrf1, Tsen54, Pusl1, Magoh, Ints2, Prpf19, Sf3b1, Ints8, Tarbp2, Ppih, Hnrnpk, Ctu1, Jmjd6, Srrm2, Dbr1, Wdr12, Celf2, Ddx54, Dus4l
Protein ubiquitination 0.0209 Bmi1, Prpf19, Ube4b, Traf7, Cbx8, Stub1
Protein complex biogenesis 0.0211 Ighmbp2, Gm6682, Brf1, Ptrf, Ang, Tbca, Tubb5, Tubg1, Mbd2, Gas7, Tuba1b, Lipe
Protein complex assembly 0.0211 Ighmbp2, Gm6682, Brf1, Ptrf, Ang, Tbca, Tubb5, Tubg1, Mbd2, Gas7, Tuba1b, Lipe
Small GTPase mediated signal transduction 0.0218 Ralgps2, Rab5c, Rab4a, Mras, Ptplad1, Rfxank, Cdc42ep1, Rab11b, Rem1, Rab5a, Rras, Sdcbp, Rap1b
Transcription 0.0259 Bmi1, Ascc1, Foxo1, Pawr, Cbx8, Rfxank, Ighmbp2, Med28, Ang, Med26, Anp32a, Cep290, Zfp275, Sertad1, Zfp239, Nfkbiz, Phrf1, Brf1, Sox11, Zfp628, Ccnl1, Gtf2h3, Hmg20a, Mbd2, Zfp593, Ptrf, Zmiz1, Ncoa5, Zfp710, Irx3, Polr2f, Zfp397, Trib3, Ctnnd1, Zfp758, Zfp110, Nr1d1, Zfp523, Traf7, Mars, Tfdp1, Zfp251, Txnip, Zbtb7a, Klf12, Smad6, Hdac2, Jmjd6, Atxn7, Thrap3, Irf3, Zbtb3, Ddx54, Tbl1x, Ncor1, Lipe
Insulin receptor signaling pathway 0.0288 Slc2a8, Foxo1, Stxbp4, Pik3r1
Macromolecular complex subunit organization 0.0318 Gm6682, Brf1, Hist1h2be, Mbd2, Gas7, Ighmbp2, Tarbp2, Ptrf, Tbca, Ang, Tubb5, Celf2, Tubg1, Tuba1b, Lipe, Smarca4
Vesicle-mediated transport 0.0321 Pacs1, Vps29, Sec24b, Mrc2, Dennd1a, Use1, Vps41, Fnbp1, Cadps2, Jmjd6, Rab5a, Exoc4, Exoc3, Sec22c, Snap23, Ehd1, Stx5a, Epn1, Ap2m1
Intracellular protein transport 0.0341 Txnip, Pacs1, Sec24b, Snupn, Rasl2-9, Vti1b, Vps41, Stxbp4, Ywhag, Tomm7, Mrpl45, Stx5a, Ap2m1
Protein modification by small protein conjugation 0.0412 Bmi1, Prpf19, Ube4b, Traf7, Cbx8, Stub1
Lipid biosynthetic process 0.0420 Cyp51, Scd1, Scd2, Hsd17b12, Prkab1, Fads2, Pisd, Pigs, Tecr, Aldh1a1, Prpf19, Ang, Gal3st1
Gene silencing 0.0476 Tarbp2, Cbx8, Kcnq1, Sirt2, Smarca4