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. 2015 Sep 4;16(10):1318–1333. doi: 10.15252/embr.201540436

Table 1.

Data collection and refinement statistics

T4 lysozyme‐MCU NTD T4 lysozyme‐MCU NTD S92A MCU NTD‐E
PDB ID: 4XSJ PDB ID: 5BZ6 PDB ID: 4XTB
Data collection
Space groupa P65 P65 P65
X‐ray sourceb and detector PAL‐5C ADSC Q315r PAL‐5C ADSC Q315r PAL‐7A ADSC Q270
Wavelength (Å) 0.9795 0.9795 0.9793
Unit cell: a, b, c (Å) 98.1, 98.1, 62.4 97.8, 97.8, 61.5 55.5, 55.5, 68.9
α, β, γ (°) 90.0, 90.0, 120.0 90.0, 90.0, 120.0 90.0, 90.0, 120.0
Resolution range (Å)c 50–1.80 (1.83–1.80) 50–2.75 (2.80–2.75) 50−1.50 (1.53−1.50)
R merge d 6.8 (54.6) 12.3 (56.3) 4.7 (51.5)
II 18.2 (3.2) 6.8 (3.3) 11.9 (3.6)
Completeness (%) 99.5 (98.3) 99.5 (100.0) 99.4 (100.0)
Redundancy 8.0 (6.3) 4.7 (5.3) 5.7 (5.6)
Refinement
Resolution range (Å)c 48.5–1.80 34.9–2.75 48.0–1.50
No. reflections 29581 8147 17594
R work e (%)/R free (%) 12.7/19.0 16.4/23.5 14.0/17.6
No. atoms
Protein 2008 2007 863
Ligand 13f
Ion (SO42) 15 30
Water 431 41 143
B‐factors (Å2)
Protein 27.0 33.7 18.2
Ligand 30.3
Ion (SO42) 40.6 56.7
Water 47.4 29.9 39.5
Model statistics
rmsd bond length (Å) 0.010 0.014 0.010
rmsd bond angles (°) 1.33 1.67 1.64
Ramachandran plot (%) favoured/allowed/disallowed 98.8/1.2/0 97.2/2.8/0 99.1/0.9/0
a

P65‐related MCU NTD/MCU NTD interactions are conserved in these three P65 crystal forms.

b

Beamline 5C and 7A at Pohang Accelerator Laboratory (PAL) in South Korea.

c

Values in parentheses are for highest‐resolution shell.

d

R merge = ∑hi │I(h)i−‹I(h)›│/∑hiI(h)i, where I(h) is the intensity of reflection of h, ∑h is the sum over all reflections and ∑i is the sum over i measurements of reflection h.

e

R work = ∑hkl ¦¦Fo¦‐¦Fc¦¦/∑hkl¦Fo¦; 5% of the reflections were excluded for the R free calculation.

f

An unidentified electron density was observed and modeled with a tetraethylene glycol molecule.