Figure 3. Heatmaps of gene set enrichment analysis (GSEA) of DEGs based on RNAseq data in response to abiotic stresses.

GO annotation from P. patens genome annotation (v1.6) was analyzed with Blast2GO using the default parameters. The g:Profiler tool was used to classify the GSEA of P. patens stressed-DEGs for each condition based on up- and down-regulation status of the genes. (a) Selected functional groups for up regulated genes. (b) Selected functional groups for down regulated genes. The color intensities indicate the level of enrichment score of each GO term. Enrichments score is log₁₀ (gene number). See Supplementary Datasets 15 and16 for the complete lists.