Table 3. The hydrogen bonds formed between inhibitors and residuesa.
complex | Donor | Acceptor | Distance(Å) | Angle(°) | Frequency(%)b |
---|---|---|---|---|---|
pDI6W-MDMX | F19′-N-H | Q71-NE1 | 2.92 | 135.12 | 53.34 |
W23′-NE1-HE1 | M53-OE1 | 2.88 | 1490.41 | 91.72 | |
pDI6W-MDM2 | F19′-N-H | Q72-NE1 | 3.01 | 138.45 | 71.64 |
W23′-NE1-HE1 | L54-OE1 | 2.87 | 150.36 | 99.09 | |
pDIQ-MDMX | F19′-N-H | Q71-NE1 | 2.90 | 136.37 | 58.21 |
W23′-NE1-HE1 | M53-OE1 | 2.92 | 136.82 | 90.79 | |
pDIQ-MDM2 | F19′-N-H | Q72-NE1 | 2.89 | 139.51 | 60.06 |
W23′-NE1-HE1 | L54-OE1 | 2.89 | 148.18 | 98.96 |
aThe hydrogen bonds determined by the acceptor…donor atom distance of less than 3.5 Å and acceptor…H-donor angle of greater than 120 Å,
bOccupancy (%) is given as the percentage of simulation time that a hydrogen bond exist.