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. 2015 Nov 30;5:16943. doi: 10.1038/srep16943

Table 1. Crystallographic statistics.

  Apoenzyme Holoenzyme Ternary Complex
Data collection statistics
Space group P 21 21 21 P 21 21 21 P 21 21 21
Cell edges (Å) 33.9, 75.4, 116.6 33.9, 73.1, 103.2 53.1, 60.3, 76.2
Molecules per asymmetric unit 1 1 1
Wavelength (Å) 1.13956 0.97857 0.97857
Resolution (Å) 46.11–3.17 42.17–1.63 47.3–1.32
High resolution shell (Å) (3.34–3.17) (1.72–1.63) (1.39–1.32)
Number of observations 29900 238973 420749
Number of unique reflections 16610 32962 58303
Multiplicity 1.8 (1.7) 7.2 (7.4) 7.2 (7.1)
Rmerge 0.138(0.596) 0.062 (0.546) 0.031 (0.078)
Rpim 0.138 (0.562) 0.025 (0.214) 0.026 (0.367)
Mean I/σ(I) 5.5.(2.6) 19.4(4.4) 14.2(2.6)
CC1/2 0.984 (0.679) 0.999 (0.870) 0.999 (0.717)
Wilson B factor (Å2) 51.3 22.5 16.2
Completeness (%) 98 (97) 100 (100) 100 (100)
Refinement statistics
Resolution 63.01–3.17 42.7–1.63 47.29–1.32
Number of reflections 4968 31248 54587
R-factor/R-free± 0.178/0.227 0.184/0.214 0.170/0.192
Number of atoms (protein/ligand/water) 1796/1/0 1789/47/259 1872/113/190
rmsd bond length 0.0112 0.0216 0.0289
rmsd bond angle 1.61 2.32 2.84
Ramachandran plot      
Residues in most favoured regions (%) 93.4 97.1 97.5
Outliers (%) 0 0 0

Rmerge = Σhkl Σi |Ii–<I> |/−Σhkl ΣIi, where Ii is the intensity of the ith observation, <I> is the mean intensity of the reflection and the summations extend over all unique reflections (hkl) and all equivalents (i), respectively.

Rpim is a measure of the quality of the data after averaging the multiple measurements and Rpim = Σhkl [n/(n-1)]1/2 Σi |Ii(hkl)–<I(hkl) >|/Σhkl Σi Ii(hkl), where n is the multiplicity, other variables as defined for Rmerge21.

±R-factor = Σhkl |Fo–Fc |/Σhkl Fo, where Fo and Fc represent the observed and calculated structure factors, respectively. The R-Factor is calculated using 95% of the data included in refinement and R-free the 5% excluded. The values presented in this Table are from AIMLESS22, PHENIX.REFINE23 and PROCHECK24 from the CCP4 suite.