Table 2. Hydrogen bonds between holoenzyme and precorrin-6B.
| Pyrrole ring | Carboxylate | Hydrogen bonds |
|---|---|---|
| A | Acetate | (O28) Hydrogen bonds to main chain amide of Lys196 and carbonyl of Ala133 via bound water molecule(O29) Hydrogen bonds to NZ Lys206 and carbonyl of Lys196 via bound water molecule |
| Propionate | (O33) Hydrogen bonds to NH1 Arg153, NZ of Lys206 and bound water (water also hydrogen bonds to OD2 Asp181 and NH Lysine 206)(O34) Hydrogen bonds to both NE Arg153 | |
| B | Acetate | (O39) Hydrogen bonds to main chain amide of Thr11 and bound water(O40) No clear hydrogen bonding |
| Propionate | (O44) Hydrogen bonds to OG1 of Thr11(O45) Hydrogen bonds to OG of Ser14 and bound water | |
| C | Acetate | (O22) Hydrogen bonds to NH2 of Arg173 and OG1 of Thr35(O23) Hydrogen bonds to NE of Arg173 |
| Propionate | (O51) Hydrogen bonds main chain amides Ala32 and Arg34.(O52) Hydrogen bonds main chain amide of Ala32 and O3’ of nicotinamide ribose ring NADPH | |
| D | Propionate | (O58) Hydrogen bonds to NZ Lys136 and water(O59) Main chain amide of Val55 and water |
| Acetate | (O62) Hydrogen bonds to NZ of Lys196, NH2 of Gln137 and a bound water(O63) Hydrogen bonds to main chain amides of Lys136 and Gln137 |
Hydrogen-bonds involving conserved basic residues are underlined.