Table 3.
Comparison of expression values (average expression ratio inoculated/control) obtained by MACE and qRT-PCR.
| Transcript | Annotation | MACE | qRT-PCR |
|---|---|---|---|
| Contig13264 | Probable alpha-N-arabinofuranosidase B | 171.91 | 168.41 |
| Contig12940 | Cuticle-degrading protease | 2478.24 | 497.65 |
| Contig11798 | Pisatin demethylase | 145.46 | 150.74 |
| Comp79036_c0_seq1 | Integral membrane protein (Pth11) | Only “in planta” | 1.99 |
| Comp7688_c2_seq1 | MAP kinase kinase skh1/pek1 | 97.74 | 0.56 |
| Comp56538_c0_seq1 | Isotrichodermin C-15 hydroxylase | Only “in planta” | 720.68 |
| Contig11477 | OsmC family protein | 58.85 | 36.82 |
| Comp6720_c1_seq1 | Fungal specific transcription factor domain containing protein | Only “in planta” | 4.95 |
| Contig6518 | Non-histone chromosomal protein 6A | 163.25 | 6.35 |
| Contig13025 | Phospholipase D/Transphosphatidylase | 347.67 | 69.96 |
| Comp427_c0_seq1 | Probable rhamnogalacturonate lyase A | Only “in planta” | 8.95 |