Specifications | |
---|---|
Organism/cell line/tissue | Plum (Prunus salicina)/leaves |
Sex | N.A. |
Sequencer or array type | HiSeq2000 |
Data format | Raw and processed |
Experimental factors | Transcriptome profiling of two different Japanese plum cultivars |
Experimental features | Leaves of two different Chinese cultivars referred to as Formosa and Akihime were harvested for total RNA extraction. Prepared libraries were paired-end sequenced by the HiSeq 2000 system. The obtained data was subjected to de novo transcriptome assembly using Trinity, and coding regions were predicted by TransDecoder. We performed BLASTP against the NCBI non-redundant (nr) dataset to annotate identified proteins. |
Consent | N/A |
Sample source location | Hoengseong, South Korea (37°28′49.6″N 127°58′34.3″E) |