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Comparison of contact map formats
| Dense format (MB) | Sparse symmetric format (MB) | |
|---|---|---|
| IMR90_CCL186 1 Mbp | 27 | 49 |
| IMR90_CL186 500 kbp | 82 | 181 |
| IMR90_CCL186 150 kbp | 822 | 911 |
| IMR90_CCL186 40 kbp | 12,000 | 1900 |
| IMR90_CL186 20 kbp | 45,000 | 2600 |
| IMR90_CL186 5 kbp | 720,000 | 4200 |
Disk space for IMR90_CCL186 genome-wide contact maps generated using either the classical dense format or the sparse symmetric format at different resolutions
