Table 3.
Estimated posterior means of parameters (posterior SD) from BayesB (pig data set).
| Trait | Parameter | Analyses | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Across groups | Interaction model | Stratified | |||||||||
| G1 | G2 | G3 | Main | G1 | G2 | G3 | G1 | G2 | G3 | ||
| T3 | Scale | 2.04 (0.647) | 1.09 (0.785) | 0.532 (0.434) | 0.624 (0.616) | 0.670 (0.156) | 3.760 (1.500) | 1.599 (1.032) | 4.421 (4.114) | ||
| Prob. In | 0.345 (0.108) | 0.304 (0.154) | 0.390 (0.140) | 0.336 (0.188) | 0.504 (0.104) | 0.269 (0.099) | 0.412 (0.170) | 0.358 (0.196) | |||
| Res. Var. | 0.754 (0.050) | 0.857 (0.045) | 0.784 (0.034) | 0.710 (0.057) | 0.825 (0.051) | 0.706 (0.035) | 0.701 (0.055) | 0.832 (0.049) | 0.697 (0.039) | ||
| 2.504 (0.644) | 2.014 (0.688) | 0.455 (0.300) | 0.291 (0.166) | 0.182 (0.134) | 5.956 (1.169) | 5.891 (3.035) | 2.099 (0.621) | ||||
| T4 | Prob. In | 0.486 (0.118) | 0.516 (0.144) | 0.349 (0.121) | 0.290 (0.115) | 0.437 (0.127) | 0.282 (0.064) | 0.250 (0.116) | 0.503 (0.117) | ||
| Res. Var. | 0.596 (0.046) | 0.633 (0.037) | 0.673 (0.031) | 0.545 (0.051) | 0.614 (0.038) | 0.663 (0.031) | 0.533 (0.057) | 0.618 (0.043) | 0.681 (0.036) | ||
| T5 | 2.737 (0.654) | 2.556 (0.835) | 0.310 (0.188) | 0.352 (0.123) | 0.207 (0.216) | 2.983 (1.800) | 2.592 (0.802) | 4.500 (3.499) | |||
| Scale Prob. In | 0.426 (0.110) | 0.387 (0.104) | 0.343 (0.127) | 0.417 (0.124) | 0.384 (0.158) | 0.469 (0.178) | 0.445 (0.114) | 0.295 (0.139) | |||
| Res. Var. | 0.460 (0.035) | 0.692 (0.040) | 0.632 (0.028) | 0.438 (0.036) | 0.634 (0.042) | 0.628 (0.03) | 0.450 (0.039) | 0.683 (0.052) | 0.659 (0.034) | ||
T3, T4, and T5 are three different traits. G1, G2, and G3 identify groups 1, 2 and 3, respectively. Prob. In represent the estimated proportion of markers with no-null effect and Res. Var. denotes residual variance. In the interaction model Main refers to the main effect and G1–G3 refer to interactions.