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. Author manuscript; available in PMC: 2015 Dec 3.
Published in final edited form as: J Comput Biol. 2010 Mar;17(3):443–457. doi: 10.1089/cmb.2009.0165

Algorithm 1.

Find core subgraph

Input: Graph G, Vertex subset V (τ), maximum p-value of interest maxPvalue
Output: Vertex subset core(τ)
root ←HierchicalClustering(V (τ))
return DivideCluster(root, maxPvalue)