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. 2015 Dec 4;5:17662. doi: 10.1038/srep17662

Table 1. Characteristics of the G. barbadense genome.

  Whole genome Allocated to subgenomes
At-subgenome Dt-subgenome Ungrouped
Assembly
 Scaffold N50 (Mb) 0.260 0.253 0.306 0.157
 Maximum scaffold length (Mb) 2.15 1.63 2.15 0.96
 Minimum scaffold length (Mb) 0.001 0.001 0.001 0.001
 Number of scaffolds 29,751 14,319 6,967 8,465
 Total length of assemblies (Mb) 2,573.19 1,493.53 852.98 226.68
 Total gaps in assemblies (Mb) 334.55 223.47 82.35 28.72
Annotation
 Number of protein-coding genes 80,876 36,947 34,575 9,354
 Average gene density (per 100 kb) 3.14 2.47 4.05 4.12
 Average exon/intron sizes (bp) 283.40/423.41 283.07/434.49 281.81/422.92 290.92/449.44
 Total size of transposable elements (Mb) 1,778.62 1097.99 541.57 139.06