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. 2015 Nov 27;2:99. Originally published 2013 Mar 28. [Version 3] doi: 10.12688/f1000research.2-99.v3

Table 1. Primers used in conventional, inverse and real-time PCR reactions.

Primer Primer sequence (5' – 3') Size (bp) Target
Primers for conventional PCR
Ges F
Ges R
GCGTTTTGCAATGTGCTC
CCAGTTTTCTCTCCAACAACC
519 Internal fragment of
bla GES gene
Primers for inverse PCR
Gcu14 FSQ
Gcu14 RSQ
AGCAATCAACACACAGGGG
CTCGCGTAAATGCACCGCTT
130 gcu14 circular form
GES FSQ
GES RSQ
CAAGTTATTACACAACTCAT
AGTGCGTGAATGAAGCGCAT
110 bla GES-1 circular form
AACA4 FSQ
AACA4 RSQ
GCCAGGCATTCGAGCGAACAC
ATTTAGCCACTCACATAGAGC
188 aacA4 circular form
Primers and probes for real time PCR (TaqMan)
RpsL F
RpsL R
Probe
GCCTGCGCTGCAAAACT
TTTCGGCGTGGTGGTGTAT
TCGTGGCGTATGCACC
67 rpsL transcripts
Gcu14 F
Gcu14 R
Probe
CATGCGCTTCTTGGTTCGT
ACGCCAGCTTGGATGCAA
ATGCCACGAGACCTT
56 gcu14 transcripts
Ges F2
Ges R2
Probe
GTGCAGCTTAGCGACAATGG
CACAGAGTCGCCAATTTTACGA
AATTGCAGCAGGTCCGCC
99 bla GES-1 transcripts
AacA4 F
AacA4 R
Probe
CAAGCGTTTTAGCGCAAGAGT
TCGGCTCTCCATTCAGCATTG
CCGTCACTCCATACATTG
59 aacA4 transcripts
Ges F3
AacA4 R2
Probe
TCCTGAGCACGGACAAATAG
TCATAGAGCATCGCAAGGTC
TTCCGTCACACTGCGCCTCA
134 Polycistronic transcripts