Table 2.
NetCTL predicted top scoring CTL epitopes along with start position and processing score for the HLA-A supertypes in 25 L. major candidate antigens.
| Antigens | A1 | A2 | A3 | A24 | A26 |
|---|---|---|---|---|---|
| 1 | NTDNFFFML (228: 2.3073) |
SLWSLLAGV (127: 1.4042) |
NLAAGQSLK (489: 1.4921) |
LYLLLPFLL (19: 1.9727) |
YTISLNPLL (512: 1.6485) |
|
| |||||
| 2 | MSSTSFDDY (38: 3.3876) |
ALVSINVPL (224: 1.3414) |
SLFRVANCK (238: 1.4763) |
VWCTVPDCI (421: 1.4489) |
SVVDPMQNY (409: 2.3630) |
|
| |||||
| 3 | CTQCAPNYY (308: 2.8811) |
LLTSFAMHL (495: 1.0227) |
SSYSCVSQK (469: 1.6062) |
GYAKDSNGF (175: 1.5045) |
YVVDSYDGL (351: 1.4847) |
|
| |||||
| 4 | FIDANTAIY (122: 3.1585) |
MLPDMTCSL (390: 1.4053) |
SSYSCVSQK (674: 1.6062) |
GYIVVDKYF (93: 1.4189) |
YVVDSYDGL (556: 1.4847) |
|
| |||||
| 5 | TTSTTTNTV (68: 1.4293) |
LMAAMLVAV (7: 1.2898) |
TMPTAPSSK (43: 1.1211) |
GYMPTASFK (142: 0.8997) |
ETASTTSTT (64: 0.5879) |
|
| |||||
| 6 | VSAQTIDDY (32: 2.4784) |
YLCDRTTAA (123: 1.1971) |
VSYTCIPRK (241: 1.5973) |
GYPNINTYL (116: 1.1822) |
QTIDDYPPV (35: 1.4284) |
|
| |||||
| 7 | TAAVKPLSY (18: 1.8789) |
TLASHPHYL (208: 1.2381) |
RVAEFLVVK (198: 1.3425) |
HYLHEANVF (214: 1.6364) |
EVPICSLEF (185: 1.0192) |
|
| |||||
| 8 | SIMSLQIRY (127: 1.1734) |
FLFSPTDTL (12: 1.3828) |
RIKRNWQKK (38: 1.3737) |
IFMRLEDTI (185: 1.4289) |
SIIEKATRY (200: 2.2008) |
|
| |||||
| 9 | YREILNEFY (162: 1.6879) |
FVAKYIPTI (96: 1.3345) |
LMMSCWSAR (3: 1.1799) |
LYTPALPPF (17: 1.7705) |
EVIEDLVVW (321: 1.7072) |
|
| |||||
| 10 | SASNHKEFY (11: 1.8707) |
RMDVIGATV (52: 1.1546) |
EFYIYYLAK (17: 0.7897) |
QWTRRMHLI (29: 1.3589) |
SASNHKEFY (11: 0.9535) |
|
| |||||
| 11 | LTDEKTCLK (346: 1.7725) |
FLTDEKTCL (345: 1.2608) |
QAFGRAIPK (51: 1.2646) |
TYAGTLPEM (90: 1.0075) |
YVSGISPTY (83: 1.6128) |
|
| |||||
| 12 | LTDERTCLV (508: 2.3650) |
FLTDERTCL (507: 1.2308) |
RIQQLVLRK (230: 1.3906) |
LYIWNMPLL (112: 1.9046) |
TTITSTTKL (445: 1.1733) |
|
| |||||
| 13 | LTDERTCLV (721: 2.3650) |
MLSAENLQL (469: 1.2642) |
KSLTNLYLK (422: 1.3473) |
EWSRVTSLL (200: 1.6263) |
EMKSLTNLY (396: 1.8138) |
|
| |||||
| 14 | DLEEEVEEY (115: 1.8614) |
TLLEQYASL (292: 1.2313) |
LLEQYASLK (293: 1.3401) |
SFPPSPSLL (2: 1.4148) |
QVKELKVSY (182: 1.2390) |
|
| |||||
| 15 | QTRVHPGLY (116: 2.0525) |
YLLDGDQLI (71: 1.4042) |
RSAPHHSRR (226: 1.3101) |
LFGAFLFAF (388: 1.2731) |
DVKESNAHV (48: 1.1458) |
|
| |||||
| 16 | LVDTTAWRY (1027: 3.6396) |
MLWETVAAL (290: 1.3564 |
RTATARLHK (248: 1.5070) |
LFQRVLAPI (982: 1.1324) |
EAQDHSCFY (628: 1.9956) |
|
| |||||
| 17 | KADTYVEEF (82: 1.3354) |
VLAVVVLLV (10: 1.1790) |
HLRGAATGK (74: 1.4033) |
DMATVFAYF (151: 1.2555) |
STVRLLVSF (163: 1.4330) |
|
| |||||
| 18 | ATSNAASRY (119: 3.2566) |
TMADVLLYA (135: 1.2997) |
ATMADVLLY (134: 1.3320) |
QFLINSSSI (2: 1.2187) |
ATMADVLLY (134: 1.7501) |
|
| |||||
| 19 | FTSGEISFY (21: 3.4722) |
YMNLISQSI (1056: 1.2709) |
LLYCRESRK (1039: 1.6445) |
AYLRELFPV (702: 1.3356) |
FTSGEISFY (21: 2.3098) |
|
| |||||
| 20 | NTTTAVRGY (27: 1.7205) |
ILMWSFAAL (204: 1.3025) |
ALFVVMAMY (211: 1.2263) |
NWWILMWSF (201: 1.5092) |
NTTTAVRGY (27: 1.5857) |
|
| |||||
| 21 | LASLLSSKY (1096: 1.7120) |
ALARYPLPV (58: 1.3281) |
ALASLLSSK (1095: 1.5764) |
VYILLTEFL (1138: 1.6493) |
HVARQLASY (980: 2.0702) |
|
| |||||
| 22 | YMDPGAAGY (201: 3.0231) |
TLFPIDVTV (220: 1.3367) |
ALYTSIPVR (288: 1.4227) |
LFLLVIYAF (35: 1.7091) |
EAAHFLMAY (155: 2.1321) |
|
| |||||
| 23 | CTGSSPSVY (8: 2.2878) |
VLIDYLLSM (252: 1.4781) |
TLASSAAVK (184: 1.5850) |
VYFTLPTAV (15: 1.3233) |
VLIDYLLSM (252: 1.3831) |
|
| |||||
| 24 | LTAPVYMQY (106: 3.2540) |
LMFSLSQSL (98: 1.2637) |
RLTPFFQNY (115: 1.2825) |
LYRIDGTLI (181: 1.3091) |
ATGDQVSGY (155: 1.9446) |
|
| |||||
| 25 | ISDTQVLLA (264: 1.5818) |
VLVGVVLGV (539: 1.2310) |
LVHAGIAGK (486: 1.3287) |
AYFVVPLEM (356: 1.1485) |
STVLRLFSF (24: 1.4346) |