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. 2015 Dec 7;10(12):e0144465. doi: 10.1371/journal.pone.0144465

Table 2. Strains and plasmids used in this study.

Strain or plasmid Description Reference or source
E. coli
    DH5α λpir F φ80 lacZ ΔM15 recA1 end A1 hsdR17 supE44 thi-1 gyrA96 relA1 (lacZYA-argF) U169 λpir lysogen Laboratory collection
    NEB5α NEB
    β2163 (F-) RP4-2-Tc::Mu ΔdapA::(erm-pir) [21]
    LP79 MG1655 MGIVmi1 res2::pSW23T (NxR, CmR) [22]
    LP86 MG1655 MGIVmi1 res2::pSW23T pKD46 (NxR, CmR, ApR) This study
    LP116 MG1655 MGIVmi1 res2::pSW23T Δvmi480-470 (NxR, CmR) This study
    LP128 MG1655 MGIVmi1 res2::pSW23T Δvmi480 (NxR, CmR) This study
    LP134 NEB5α pBAD30-vmi480-470 (ApR) This study
    LP135 NEB5α pBAD30-vmi470 (ApR) This study
    LP192 NEB5α pBAD30-vmi480 (ApR) This study
    LP194 DH5α λpir pLP10 (CmR) This study
    LP196 DH5α λpir pLP11 (CmR) This study
    LP197 DH5α λpir pLP12 (CmR) This study
V. alginolyticus
    E0601 Isolated from seawater in Yangjiang, China This study
    LP204 E0601 hem::pLP11 (CmR) This study
    LP206 E0601 hem::pLP12 (CmR) This study
    LP207 E0601 Δhem (resulted from LP204) This study
    LP208 E0601 Δhem (resulted from LP206) This study
V. cholerae
    HN375 Isolated from seawater in Zhanjiang, China This study
    LP228 HN375 degS::pLP12 (CmR) This study
    LP233 HN375 ΔdegS This study
    LP230 HN375 vasC::pLP12 (CmR) This study
    LP235 HN375 ΔvasC This study
V. parahaemolyticus This study
    E0680 Isolated from an oyster in Yangjiang, China This study
    E06135 Isolated from Litopenaeus vannamei in Yangjiang, China This study
    LP246 E0680 pilO:: pLP12 (CmR) This study
    LP250 E0680 ΔpilO This study
    LP248 E06135 ascS:: pLP12 (CmR) This study
    LP252 E06135 ΔascS This study
V. vulnificus This study
    ATCC 27562 ATCC
    LP239 ATCC 27562 impB:: pLP12 (CmR) This study
    LP244 ATCC 27562 ΔimpB This study
Plasmids
    pSW23T oriT RP4 oriV R6K (CmR) [21]
    pSW25T-ccdB oriT RP4 oriV R6K ccdB (SpR) Laboratory collection
    pBAD30 ori p15A araC PBAD (ApR) [40]
    pKD4 PCR template for one-step gene inactivation (KnR) [25]
    pKD13 PCR template for one-step gene inactivation (KnR) [25]
    pKD46 λ- recombination plasmid (ApR) [25]
    pCP20 Helper plasmid to delete resistant gene with FRT sites (ApR) [25]
    pLP10 oriT RP4 oriV R6K ccdB PTAC promoter (CmR) This study
    pLP11 oriT RP4 oriV R6K vmi480 PTAC promoter (CmR) This study
    pLP12 oriT RP4 oriV R6K vmi480 PBAD (CmR) This study
    pLP11-hem pLP11 containing homologous arms of hem gene of E0601 This study
    pLP12-hem pLP12 containing homologous arms of hem gene of E0601 This study
    pLP12-degS pLP12 containing homologous arms of degS gene of HN375 This study
    pLP12-vasC pLP12 containing homologous arms of vasC gene of HN375 This study
    pLP12-pilO pLP12 containing homologous arms of pilO gene of E0680 This study
    pLP12-ascS pLP12 containing homologous arms of ascS gene of E06135 This study
    pLP12-impB pLP12 containing homologous arms of impB gene of ATCC 27562 This study