Table 4. Diversity and frequency of single-nucleotide polymorphisms displayed by Giardia duodenalis sub-assemblage BIII isolates at the glutamate dehydrogenase locus (partial sequence between positions 61 to 450) identified in the present study.
Nucleotide at position of reference sequence AF069059 | |||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
87 | 99 | 132 | 147 | 150 | 162 | 174 | 219 | 237 | 247 | 270 | 276 | 309 | 330 | 336 | 341 | 351 | 381 | 387 | 402 | ||
C | C | C | T | G | T | C | T | T | A | C | T | C | C | C | G | C | G | C | G | ||
Isolate | Number of isolates | ||||||||||||||||||||
KT310355 | 1 | . | . | Y | Y | R | Y | Y | . | C | . | M 1 | . | T | . | Y | . | . | . | . | R |
KT310356 | 1 | . | T | . | Y | R | . | . | . | Y | . | . | . | Y | Y | Y | . | . | . | . | R |
KT310357 | 1 | . | Y | . | Y | . | . | . | Y | Y | M | . | . | Y | Y | . | . | Y | . | Y | R |
KT310358 | 1 | Y | . | . | Y | R | . | . | . | . | . | . | . | T | . | Y | R | . | R 2 | . | . |
KT310359 | 1 | . | Y | . | Y | R | . | . | . | . | . | . | C | T | . | T | . | . | . | . | . |
M: A/C; R: A/G; Y: C/T.
1p.D90E.
2p.R114K.