Table 1.
454 pyrosequencing | DGGE | ||||||
---|---|---|---|---|---|---|---|
Sample type | Sample ID | N (total sequence reads) | Observed richness (sequence reads) | Chao1 richness (sequence reads) | Shannon diversity | Richness (# bands) | Gini evenness |
Influent | WM1 | 3464 | 453 | 696 | 5.28 | 20 | 0.67 |
Influent | WM2 | 3052 | 1590 | 2378 | 6.37 | 8 | 0.82 |
Influent | WM3 | 3672 | 592 | 1009 | 5.10 | 26 | 0.54 |
Influent | WM4 | 4144 | 802 | 1629 | 5.83 | 33 | 0.47 |
Influent | WM5 | 4260 | 693 | 1349 | 5.45 | 27 | 0.58 |
Cotton sample | Ref | 2705 | 439 | 696 | 5.20 | n.a. | n.a. |
Cotton sample | WM1 | 4387 | 561 | 962 | 4.50 | 9 | 0.82 |
Cotton sample | WM2 | n.a. | n.a. | n.a. | n.a. | 11 | 0.77 |
Cotton sample | WM3 | 3089 | 493 | 904 | 3.99 | 18 | 0.73 |
Cotton sample | WM4 | 6151 | 693 | 1250 | 5.42 | 15 | 0.78 |
Cotton sample | WM5 | n.a. | n.a. | n.a. | n.a. | 14 | 0.72 |
Greywater | WM1 | 2568 | 804 | 1460 | 5.49 | 18 | 0.61 |
Greywater | WM2 | n.a. | n.a. | n.a. | n.a. | 22 | 0.52 |
Greywater | WM3 | 4565 | 768 | 1754 | 5.34 | 24 | 0.56 |
Greywater | WM4 | 2726 | 632 | 1299 | 4.92 | 25 | 0.62 |
Greywater | WM5 | n.a. | n.a. | n.a. | n.a. | 16 | 0.68 |
n.a., not available.