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Rarefaction curves of number of observed OTUs based on 97% sequence similarities for treatment group at different time points. Abbreviations: NI_3 D, non-infected chicks at 3 days old; NI_8 D, non-infected chicks at 8 days old; SE_2 DPI, S. Enteritidis-infected chicks at 2 days post infection; SE_7 DPI, S. Enteritidis-infected chicks at 7 days post infection.
