Table 1.
MIGS ID | Property | Term | Evidence codesa |
---|---|---|---|
Current classification | Domain Bacteria | TAS [35] | |
Phylum Proteobacteria | TAS [36] | ||
Class Alphaproteobacteria | TAS [37] | ||
Order Rhizobiales | TAS [38] | ||
Family Rhizobiaceae | TAS [15] | ||
Genus Rhizobium | TAS [15] | ||
Species Rhizobium leguminosarum | TAS [14] | ||
Strain CC275e | TAS [12] | ||
Gram Stain | Negative | TAS [15] | |
Cell Shape | Rod | TAS [15] | |
Motility | Motile | TAS [15] | |
Sporulation | Non spore-forming | TAS [15] | |
Temperature range | Mesophile | TAS [15] | |
Optimum temperature | 28 °C | NAS | |
pH range; optimum | Unknown | NAS | |
Carbon source | Varied, chemoorganotrophic | TAS [15] | |
MIGS-6 | Habitat | Soil, root nodule | TAS [12] |
MIGS–6.3 | Salinity | Non–halophile | NAS |
MIGS–22 | Oxygen requirement | Aerobic | TAS [15] |
MIGS–15 | Biotic relationship | Free living, legume symbiotic | TAS [15] |
MIGS–14 | Pathogenicity | Non–pathogen | TAS [15, 39] |
MIGS–4 | Geographic location | Tasmania, Australia | TAS [12] |
MIGS–5 | Sample collection date | 1966 | TAS [12] |
MIGS–4.1 | Latitude | Not recorded | |
MIGS–4.2 | Longitude | Not recorded | |
MIGS–4.3 | Depth | Not recorded | |
MIGS–4.4 | Altitude | Not recorded |
aEvidence codes – IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non–traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [34]