Skip to main content
. 2015 Oct 27;112(48):E6634–E6643. doi: 10.1073/pnas.1519220112

Table S2.

Essential genes in central carbon metabolism

Synechococcus elongatus identification Name Pathway* Essentiality Conserved Redundant
SynPCC7942_2297 tal Pentose phosphate pathway Nonessential 1 0
SynPCC7942_0538 tktA Pentose phosphate pathway Essential 1 0
SynPCC7942_0604 cbbE Pentose phosphate pathway Essential 1 0
SynPCC7942_0584 rpiA Pentose phosphate pathway Essential 1 0
SynPCC7942_0529 pgl Pentose phosphate pathway Nonessential 1 0
SynPCC7942_2334 zwf Pentose phosphate pathway Nonessential 1 0
SynPCC7942_0039 gnd Pentose phosphate pathway Nonessential 1 0
SynPCC7942_0098 pyk Glycolysis Essential 1 0
SynPCC7942_0639 eno Glycolysis Essential 1 0
SynPCC7942_0469 pgmM Glycolysis Essential 1 1
SynPCC7942_1116 pgk Glycolysis Essential 1 0
SynPCC7942_1939 gap3 Glycolysis Nonessential 0 1
SynPCC7942_0245 gap1 Glycolysis Nonessential 0 1
SynPCC7942_1261 tpiA Glycolysis Essential 1 0
SynPCC7942_1443 cbbA Glycolysis Essential 1 0
SynPCC7942_0592 pfkA Glycolysis Nonessential 0 0
SynPCC7942_2029 pgi Glycolysis Essential 1 0
SynPCC7942_0781 ppsA Glycolysis Nonessential 0 0
SynPCC7942_2335 fbp Glycolysis Nonessential 0 1
SynPCC7942_0505 fbpI Glycolysis Essential 1 1
SynPCC7942_0485 pgam1 Glycolysis Essential 1 1
SynPCC7942_1516 pgam2 Glycolysis Essential 0 1
SynPCC7942_2078 pgam3 Glycolysis Nonessential 0 1
SynPCC7942_0612 gltA TCA cycle Essential 1 0
SynPCC7942_0903 acnB TCA cycle Essential 0 0
SynPCC7942_1007 fumC TCA cycle Nonessential 1 0
SynPCC7942_1719 icd TCA cycle Essential 0 0
SynPCC7942_1533 sdhB TCA cycle Nonessential 0 0
SynPCC7942_1427 cbbS Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_1426 cbbL Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_1116 pgk Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_1742 gap2 Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_1261 tpiA Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_1443 cbbA Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_2335 fbp Calvin–Benson–Bassham cycle Nonessential 0 1
SynPCC7942_0538 tktA Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_0505 fbpI Calvin–Benson–Bassham cycle Essential 1 1
SynPCC7942_0604 cbbE Calvin–Benson–Bassham cycle Essential 1 0
SynPCC7942_0977 prk Calvin–Benson–Bassham cycle Essential 0 0
SynPCC7942_0584 rpiA Calvin–Benson–Bassham cycle Essential 1 0
*

Metabolic pathway as taken from the BioCyc database (31).

Refers to conservation among all 13 of the cyanobacterial genomes studied in the work by Shi and Falkowski (26).

Functional redundancy as shown in the BioCyc database (31).