Table 2. Primer sequences used in this study.
Gene | Primer sequence (5′-3′) | Anneal .temp. (°C) | No. of cycles | Product size (bp) |
---|---|---|---|---|
RT-PCR: | ||||
GAPDH F | AGAAGGCTGGGGCTCATTTG | 55 | 25 | 287 |
GAPDH R | AGGGGCCATCCACAGTCTTC | |||
ASC/TMS1 F | TGG GCC TGC AGG AGATG | 50 | 36 | 411 |
ASC/TMS1 R | ATT TGG TGG GAT TGC CAG | |||
MSP: | ||||
ASC/TMS1 m1 | GCGGGGAGTTTAGGTTTCGTTTC | 62 | 40 | 130 |
ASC/TMS1 m2 | CCAACGCATCCAAAATAACGTCG | |||
ASC/TMS1 u1 | GAAGGTGGGGAGTTTAGGTTTTGTTTT | 62 | 40 | 140 |
ASC/TMS1 u2 | AAATTCTCCAACACATCCAAAATAACAT | |||
BGS: | ||||
ASC/TMS1 BGS F | TTG GTG TAA GTT TAGAGATAAGT | 58 | 30 | 557 |
ASC/TMS1 BGS F | ACC ATCTCCTAC AAACCCATA | |||
Real Time: | ||||
ASC/TMS1 F | TCC AGC AGC CAC TCA ACG | 55 | 45 | 66 |
ASC/TMS1 R | GCA CTT TAT AGA CCA GCA |