Table 1. A summary of genetic diversity in this lineage and sublineage, and the results of neutrality tests and mismatch distribution analyses.
Sample size | h | Hd | S.d. | Pi | S.d. | Fu's Fs | P-value | R2 | P-value | Tau | Expansion time | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
N | ||||||||||||
CYT B | 123 | 33 | 0.908 | 0.017 | 0.00925 | 0.00073 | −2.17 | 0.358 | 0.089 | 0.417 | ||
ND2 | 87 | 25 | 0.886 | 0.023 | 0.007560 | 0.00071 | −3.81 | 0.162 | 0.072 | 0.257 | ||
N1 | ||||||||||||
CYT B | 11 | 5 | 0.782 | 0.107 | 0.00220 | 0.00046 | 0.13 | 0.544 | 0.145 | 0.213 | ||
ND2 | 10 | 7 | 0.911 | 0.077 | 0.003380 | 0.00084 | −1.61 | 0.118 | 0.112 | 0.025* | ||
N2 | ||||||||||||
CYT B | 112 | 28 | 0.891 | 0.020 | 0.00662 | 0.00034 | −2.91 | 0.228 | 0.082 | 0.444 | ||
ND2 | 77 | 18 | 0.855 | 0.027 | 0.004950 | 0.00034 | −2.78 | 0.191 | 0.079 | 0.319 | ||
S | ||||||||||||
CYT B | 264 | 95 | 0.978 | 0.003 | 0.01198 | 0.00050 | −43.04 | <0.001** | 0.040 | 0.037* | ||
ND2 | 225 | 78 | 0.974 | 0.004 | 0.009540 | 0.00041 | −39.93 | 0.001* | 0.040 | 0.036* | ||
S1 | ||||||||||||
CYT B | 19 | 12 | 0.953 | 0.028 | 0.01196 | 0.00102 | 0.59 | 0.618 | 0.145 | 0.703 | ||
ND2 | 16 | 9 | 0.883 | 0.061 | 0.008670 | 0.00083 | 0.94 | 0.683 | 0.163 | 0.774 | ||
S2 | ||||||||||||
CYT B | 17 | 11 | 0.926 | 0.045 | 0.00433 | 0.00086 | −2.62 | 0.095 | 0.087 | 0.025* | 2.703 (10.707–0.834) | 13Ka (52–4) |
ND2 | 12 | 6 | 0.803 | 0.096 | 0.003110 | 0.00055 | −0.10 | 0.453 | 0.126 | 0.149 | ||
S3 | ||||||||||||
CYT B | 51 | 16 | 0.85 | 0.040 | 0.00634 | 0.00068 | −0.01 | 0.549 | 0.097 | 0.435 | ||
ND2 | 48 | 11 | 0.877 | 0.027 | 0.007050 | 0.00060 | 3.07 | 0.869 | 0.131 | 0.811 | ||
S4 | ||||||||||||
CYT B | 17 | 5 | 0.684 | 0.099 | 0.00117 | 0.00019 | −0.60 | 0.339 | 0.164 | 0.591 | ||
ND2 | 16 | 4 | 0.592 | 0.122 | 0.001840 | 0.00042 | 1.32 | 0.777 | 0.155 | 0.537 | ||
S5 | ||||||||||||
CYT B | 160 | 51 | 0.961 | 0.006 | 0.00561 | 0.00018 | −25.1 | <0.001** | 0.040 | 0.028* | 7.287 (9.018–5.006) | 35 Ka (44–24) |
ND2 | 133 | 47 | 0.949 | 0.01 | 0.003570 | 0.00021 | −39.58 | <0.001** | 0.023 | 0.010* | 3.518 (5.025–2.309) | 22 Ka (31–14) |
Abbreviations: AMOVA, analysis of molecular variance; Hd, haplotypes; Pi, nucleotide.