Table 1.
Variants that are polymorphic between littermates
| Variant count | |
|---|---|
| Intergenic | 607 |
| Intronic | 324 |
| Exonic | 11 |
| Non-synonymous | (7) |
| Synonymous | (4) |
| Splice junction | 1 |
| Upstream (<2 kb) | 18 |
| Downstream (<2 kb) | 16 |
| UTR | 8 |
| Total | 985 |
Distribution of the variant calls against C57BL/6J reference genome that differs between the two A vy littermates. The genetic differences between the Yellow and the Pseudoagouti mouse are divided relative to their genic positions. Exonic mutations have been subdivided into those that are synonymous and those that are not