Table 4. Association Analysis for validated BMI increasing SNPs and Alzheimer’s Disease, Dementia Probability, and Memory Function.
Late Onset Alzheimer’s Disease |
Dementia |
Memory |
||||||||
---|---|---|---|---|---|---|---|---|---|---|
GERAD | ADGC | HRS | HRS | |||||||
Chr | SNP | A1 | log(OR) | p | log(OR) | p | log(OR) | p | beta | p |
Adipogenesis | ||||||||||
1 | rs1555543 | C | −0.03 | 0.452 | 0.014 | 0.535 | ||||
2 | rs2890652 | C | 0 | 0.994 | 0.006 | 0.85 | −0.038 | 0.421 | −0.001 | 0.876 |
6 | rs987237 | G | 0.03 | 0.542 | −0.012 | 0.679 | −0.051 | 0.268 | 0.002 | 0.553 |
11 | rs4929949 | C | 0.02 | 0.63 | 0.013 | 0.565 | 0.01 | 0.784 | −0.001 | 0.709 |
11 | rs3817334 | T | −0.03 | 0.486 | −0.059 | 0.007 | 0.052 | 0.142 | −0.005 | 0.141 |
12 | rs7138803 | A | 0.09 | 0.999 | −0.013 | 0.549 | 0.04 | 0.277 | 0.002 | 0.436 |
16 | rs12444979 | C | 0.11 | 0.088 | 0.101 | 0.001 | −0.001 | 0.981 | −0.005 | 0.301 |
Appetite | ||||||||||
1 | rs2815752 | A | −0.01 | 0.767 | −0.003 | 0.902 | −0.041 | 0.253 | 0.005 | 0.093 |
1 | rs543874 | G | 0.01 | 0.883 | −0.021 | 0.458 | 0.014 | 0.746 | −0.003 | 0.373 |
2 | rs2867125 | C | 0.05 | 0.39 | −0.027 | 0.343 | −0.018 | 0.701 | 0 | 0.93 |
3 | rs9816226 | T | 0.04 | 0.449 | 0.04 | 0.391 | −0.004 | 0.283 | ||
11 | rs10767664 | A | 0 | 0.943 | 0.018 | 0.688 | 0.001 | 0.83 | ||
14 | rs10150332 | C | −0.03 | 0.55 | 0.019 | 0.476 | −0.038 | 0.379 | 0.001 | 0.848 |
16 | rs7359397 | T | −0.06 | 0.18 | −0.007 | 0.762 | 0.03 | 0.408 | −0.007 | 0.026 |
16 | rs1558902 | A | −0.04 | 0.313 | −0.004 | 0.905 | 0.002 | 0.568 | ||
18 | rs571312 | A | −0.04 | 0.47 | −0.025 | 0.316 | 0.046 | 0.27 | 0 | 0.924 |
Cardiopulmonary Processes | ||||||||||
1 | rs1514175 | A | 0.03 | 0.426 | −0.017 | 0.432 | −0.019 | 0.588 | −0.004 | 0.169 |
4 | rs10938397 | G | 0.06 | 0.2 | 0.035 | 0.117 | 0.003 | 0.93 | 0.003 | 0.363 |
4 | rs13107325 | T | 0.13 | 0.141 | 0.068 | 0.119 | 0.088 | 0.179 | −0.001 | 0.86 |
14 | rs11847697 | T | −0.18 | 0.112 | 0.026 | 0.671 | ||||
Unspecified Cellular Processes | ||||||||||
2 | rs713586 | C | −0.1 | 0.018 | 0.006 | 0.784 | −0.026 | 0.46 | 0.002 | 0.446 |
2 | rs887912 | T | 0.08 | 0.074 | −0.016 | 0.508 | −0.011 | 0.778 | −0.001 | 0.791 |
3 | rs13078807 | G | 0.01 | 0.912 | −0.031 | 0.236 | −0.018 | 0.675 | 0 | 0.953 |
5 | rs2112347 | T | −0.03 | 0.656 | −0.036 | 0.108 | −0.006 | 0.863 | 0.001 | 0.675 |
5 | rs4836133 | A | 0.14 | 0.002 | 0.012 | 0.613 | 0.025 | 0.482 | −0.002 | 0.52 |
6 | rs206936 | G | −0.01 | 0.83 | −0.024 | 0.365 | −0.045 | 0.318 | 0.001 | 0.756 |
9 | rs10968576 | G | 0.01 | 0.817 | 0.027 | 0.253 | 0.004 | 0.921 | 0.001 | 0.731 |
13 | rs4771122 | G | −0.04 | 0.403 | −0.012 | 0.672 | ||||
15 | rs2241423 | G | −0.05 | 0.295 | −0.005 | 0.855 | −0.037 | 0.367 | 0.007 | 0.043 |
19 | rs29941 | G | −0.02 | 0.731 | −0.033 | 0.155 | −0.017 | 0.65 | 0 | 0.907 |
19 | rs2287019 | C | −0.08 | 0.123 | −0.002 | 0.949 | −0.052 | 0.243 | 0.003 | 0.42 |
19 | rs3810291 | A | −0.06 | 0.19 | −0.053 | 0.083 | 0.02 | 0.589 | 0.003 | 0.294 |
Other SNPs not included in Polygenic Score and not validated in Speliotes et al. | ||||||||||
2 | rs7566605 | C | −0.073 | 0.111 | −0.016 | 0.665 | 0 | 0.953 | ||
10 | rs6602024 | A | −0.001 | 0.993 | −0.043 | 0.23 | −0.073 | 0.208 | 0.006 | 0.218 |
10 | rs10508503 | C | 0.046 | 0.693 | −0.017 | 0.675 | ||||
10 | rs2116830 | G | −0.058 | 0.291 | 0.02 | 0.503 | ||||
16 | rs1424233 | A | −0.013 | 0.764 | −0.022 | 0.312 | 0.003 | 0.936 | 0.001 | 0.669 |
18 | rs1805081 | G | 0.009 | 0.832 | 0.017 | 0.436 | 0.001 | 0.969 | −0.004 | 0.157 |
20 | rs6013029 | T | 0.087 | 0.4 | −0.031 | 0.533 | −0.073 | 0.389 | 0.003 | 0.706 |