Table 1.
Primers set and sequences (5′-3′) | Gene | Amplicon (bp) | References | |
---|---|---|---|---|
SEAf | TTGGAAACGGTTAAAACGAA | sea | 120 | [17] |
SEAr | GAACCTTCCCATCAAAAACA | |||
| ||||
SEBf | TCGCATCAAACTGACAAACG | seb | 478 | [17] |
SEBr | GCAGGTACTCTATAAGTGCC | |||
| ||||
SECf | GACATAAAAGCTAGGAATTT | sec | 257 | [17] |
SECr | AAATCGGATTAACATTATCC | |||
| ||||
SEDf | CTAGTTTGGTAATATCTCCT | sed | 317 | [17] |
SEDr | TAATGCTATATCTTATAGGG | |||
| ||||
SEEf | TAGATAAAGTTAAAACAAGC | see | 170 | [17] |
SEEr | TAACTTACCGTGGACCCTTC | |||
| ||||
SEGf | TGCTATCGACACACTACAACC | seg | 704 | [18] |
SEGr | CCAGATTCAAATGCAGAACC | |||
| ||||
SEHf | CGAAAGCAGAAGATTTACACG | seh | 495 | [18] |
SEHr | GACCTTTACTTATTTCGCTGTC | |||
| ||||
SEIf | GACAACAAAACTGTCGAAACTG | sei | 630 | [18] |
SEIr | CCATATTCTTTGCCTTTACCAG | |||
| ||||
SElJf | CAGCGATAGCAAAAATGAAACA | selj | 426 | [19] |
SElJr | TCTAGCGGAACAACAGTTCTGA | |||
| ||||
SElMf | CCAATTGAAGACCACCAAAG | selm | 517 | [20] |
SElMr | CTTGTCCTGTTCCAGTATCA | |||
| ||||
SElNf | ATTGTTCTACATAGCTGCAA | seln | 682 | [20] |
SElNr | TTGAAAAAACTCTGCTCCCA | |||
| ||||
SElOf | AGTCAAGTGTAGACCCTATT | selo | 534 | [20] |
SElOr | TATGCTCCGAATGAGAATGA | |||
| ||||
SElKf | ATGAATCTTATGATTTAATTTCAGAATCAA | selk | 545 | [21] |
SElKr | ATTTATATCGTTTCTTTATAAGAAATATCG | |||
| ||||
SElQf | GGAAAATACACTTTATATTCACAGTTTCA | selq | 539 | [21] |
SElQr | ATTTATTCAGTTTTCTCATATGAAATCTC | |||
| ||||
SElRf | AATGGCTCTAAAATTGATGG | selr | 363 | [22] |
SElRr | TCTTGTACCGTAACCGTTTT | |||
| ||||
SElUf | AATGGCTCTAAAATTGATGG | selu | 215 | [22] |
SElUr | ATTTGATTTCCATCATGCTC | |||
| ||||
TSST-1f | ATGGCAGCATCAGCTTGATA | tstH1 | 350 | [17] |
TSST-1r | TTTCCAATAACCACCCGTTT | |||
| ||||
16S rDNAf | ATA AGA CTG GGA TAA CTT CGG G | 16SrDNA | 500 | [23] |
16S rDNAr | CTT TGA GTT TCA ACC TTG CGG TCG |
f: forward; r: reverse.