Table 3. IGF pathway members also display altered DNA methylation.
Early | Late | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Gene | Total Windows | Significant Windows | Ratio | Hyper | Hypo | Total Windows | Significant Windows | Ratio | Hyper | Hypo |
Irs1 | 36 | 2 | 0.0556 | 0 | 2 | 35 | 19 | 0.5429 | 19 | 0 |
Igf1 | 26 | 3 | 0.1154 | 0 | 3 | 25 | 13 | 0.5200 | 12 | 1 |
Igfbp4 | 28 | 5 | 0.1786 | 1 | 4 | 20 | 9 | 0.4500 | 9 | 0 |
Stat5b | 81 | 7 | 0.0864 | 3 | 4 | 85 | 36 | 0.4235 | 18 | 18 |
Prlr | 29 | 3 | 0.1034 | 0 | 3 | 29 | 12 | 0.4138 | 12 | 0 |
Shc | 21 | 1 | 0.0476 | 0 | 1 | 21 | 8 | 0.3810 | 8 | 0 |
Igfbp3 | 11 | 0 | 0.0000 | 0 | 0 | 8 | 3 | 0.3750 | 3 | 0 |
Igf2r | 32 | 4 | 0.1250 | 1 | 3 | 28 | 10 | 0.3571 | 7 | 3 |
Igfbp6 | 3 | 0 | 0.0000 | 0 | 0 | 3 | 1 | 0.3333 | 1 | 0 |
Ghr | 45 | 5 | 0.1111 | 0 | 5 | 45 | 14 | 0.3111 | 13 | 1 |
Akt1 | 22 | 0 | 0.0000 | 0 | 0 | 20 | 6 | 0.3000 | 6 | 0 |
Akt2 | 29 | 2 | 0.0690 | 0 | 2 | 29 | 8 | 0.2759 | 8 | 0 |
Irs2 | 46 | 10 | 0.2174 | 0 | 10 | 45 | 12 | 0.2667 | 12 | 0 |
Sos | 27 | 1 | 0.0370 | 1 | 0 | 34 | 9 | 0.2647 | 3 | 6 |
Stat5a | 16 | 0 | 0.0000 | 0 | 0 | 23 | 6 | 0.2609 | 4 | 2 |
Src | 50 | 1 | 0.0200 | 1 | 0 | 48 | 10 | 0.2083 | 10 | 0 |
Stat3 | 51 | 6 | 0.1176 | 3 | 3 | 54 | 10 | 0.1852 | 5 | 5 |
Erk | 12 | 0 | 0.0000 | 0 | 0 | 13 | 2 | 0.1538 | 2 | 0 |
Igfbp2 | 14 | 0 | 0.0000 | 0 | 0 | 12 | 1 | 0.0833 | 0 | 1 |
Irs4 | 19 | 0 | 0.0000 | 0 | 0 | 20 | 1 | 0.0500 | 1 | 0 |
Igfbp5 | 3 | 0 | 0.0000 | 0 | 0 | 3 | 0 | 0.0000 | 0 | 0 |
PI3K | 2 | 0 | 0.0000 | 0 | 0 | 2 | 0 | 0.0000 | 0 | 0 |
Igfbp1 | 2 | 0 | 0.0000 | 0 | 0 | 2 | 0 | 0.0000 | 0 | 0 |