Table I. Genes differentially expressed in both 35S:AnPGII 57 and 26 plants compared with the wild type.
Differentially expressed transcripts were identified using Limma R package using an FDR < 0.05 and a module of logged FC on base 2 |log2 FC| ≥ 1.0.
| Arabidopsis Genome Initiative Code | Annotation | 57a | 26a |
|---|---|---|---|
| At1g77510 | PROTEIN DISULFIDE ISOMERASE6 | 3.3 | 2.4 |
| At1g76930 | AtEXT4 | 2.8 | 3.0 |
| At1g76960 | Unknown protein | 2.8 | 2.9 |
| At5g64120 | AtPRX71 | 2.7 | 2.7 |
| At4g02330 | PECTIN METHYLESTERASE41 | 2.4 | 1.6 |
| At1g21520 | Unknown protein | 2.4 | 2.3 |
| At1g08450 | CALRETICULIN3 | 2.2 | 2.4 |
| At5g50460 | Protein transport protein SEC61 γ-subunit | 2.1 | 1.9 |
| At1g30720 | RetOx-like flavin adenine dinucleotide-binding domain-containing protein | 2.1 | 1.9 |
| At4g21620 | Gly-rich protein | 1.8 | 1.8 |
| At3g62600 | ER-LOCALIZED DnaJ-LIKE PROTEIN 3b | 1.7 | 1.4 |
| At1g19380 | Unknown protein | 1.5 | 1.4 |
| At1g08830 | COPPER/ZINC SUPEROXIDE DISMUTASE1 (CSD1) | 1.4 | 1.4 |
| At2g38870 | Ser-type endopeptidase inhibitor | 1.4 | 2.2 |
| At1g72070 | DnaJ heat shock N-terminal domain-containing protein | 1.3 | 1.5 |
| At1g71697 | CHOLINE KINASE1 | 1.3 | 1.7 |
| At3g52500 | Aspartyl protease | −2.1 | −1.6 |
| At3g47340 | GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE1 | −1.9 | −1.6 |
| At3g15570 | NON-PHOTOTROPIC HYPOCOTYL3 family protein | −1.7 | −1.4 |
| At1g25550 | MYB family transcription factor | −1.6 | −1.7 |
a
Log2 FC of the expression in the transgenic line compared with the wild type.