. 2015 Dec 16;33(51):7283–7289. doi: 10.1016/j.vaccine.2015.10.111

Table 1.

Identification of possible epitopes. Computational analysis (http://www.mpiib-berlin.mpg.de/MAPPP/) of possible epitopes by C57BL/6 mice against the HIV transgene were cross-checked against the peptide sequence of individual peptides that were positive for IFN-γ production.

Transgene	Peptide no.	Peptide sequence	Possible epitope	Restriction
Gag	8	GTEELRSLYNTVATLYCVHE	GTEELRSL/LRSLYNTVA	H2K^b/H2K^b
17	EKAFSPEVIPMFTALSEGAT	FSPEVIPMF/VIPMFTAL	H2K^b/H2K^b
30	EPFRDYVDRFFKTLRAEQAT	VDRFFKTLR	H2K^b
31	FKTLRAEQATQEVKNWMTDT	QEVKNWMTD	H2K^b
Pol 5′	32	GTVLVGPTPVNIIGR	VGPTPVNII	H2D^b
69	ESFRKYTAFTIPSTN	RKYTAFTI	H2K^b
Nef	29	GKWSKSSIVGWPAVR	KWSKSSIV/SIVGWPAV	H2K^b/H2K^b
30	KSSIVGWPAVRERIR	SIVGWPAV	H2K^b
Pol 3′	58	IVGAETFYVDGAANR	GAETFYVD/AETFYVDG	H2K^b/H2K^b
59	ETFYVDGAANRETKL	AANRETKL	H2K^b