Table 1.

Summary of data generated in the transcriptome sequence of jute

Samples	Raw reads	Clean reads	Clean bases	Error(%)	Q20(%)	Q30(%)	GC(%)
left.fq	41,242,545	39,877,300	3.99G	0.02	98.68	95.6	43.45
right.fq	41,242,545	39,877,300	3.99G	0.03	97.85	93.87	43.51
CK_JSB	8,269,487	8,260,313	0.62G	0.03	94.62	87.84	43.13

For one paired-end(PE) cDNA library (left.fq and right.fq), which was generated from pooled equal quantities of total RNA from stem bast, stem stick, leaves, and roots, the assembled sequence data have been deposited at the NCBI Sequence Read Archive (SRA, http://www.ncbi.nlm.nih.gov/Traces/sra) under the accession number SRP060467 vide BioSamples SRS980707. For a sample sequencing data from stem bast (CK_JSB), the SRA files bearing with the accession number SRP060467 vide BioSamples SRS1047357 are deposited in NCBI