Table 3.
Species diversity in the different samples
|
Samples |
||||||
|---|---|---|---|---|---|---|
| CS 01 | CS 02 | RSMgr 01 | RSMgr 02 | RSMgr 03 | RSMgr 04 | |
| Average length (bp) | 256 | 255 | 566 | 563 | 558 | 542 |
| Alpha-diversity (species level for all taxonomic domains) | 869.90 | 889.88 | 580.16 | 603.71 | 776.61 | 704.71 |
| No. of hits for fungi | 370 | 237 | 1771 | 2047 | 1828 | 2020 |
| Richness (No. of different species of fungi) | 19 | 12 | 91 | 58 | 69 | 63 |
| Simpson-index (for fungi species) | 0.1246 | 0.1468 | 0.02128 | 0.03016 | 0.02946 | 0.03524 |
Note: Alpha-diversities were readouts from the Metagenomic Rapid Annotations with Subsystems Pipeline (MG-RAST).