Table 3.
Comparison of AMsh microarray versus RNAseq transcriptome analysisa
| Associated gene | Type | Microarray enrichment | RNAseq enrichment | RNAseq p value |
|---|---|---|---|---|
| F16F9.3 | Contains EF-hand domain pair | 416 | 26.55b | 9.26E-03b |
| F14D7.7 | Unknown function | 329 | NF | |
| T02B11.4 | Unknown function | 307 | 65.68b | 4.41E-04b |
| T02B11.3 | Unknown function | 222 | 62.72b | 1.52E-04b |
| F53F4.13 | Unknown function | 177 | 104.81b | 1.66E-03b |
| fig-1 | Predicted extracellular protein | 163 | 3.54b | 2.61E-02b |
| R05A10.3 | Unknown function | 134 | 16.59b | 2.46E-03b |
| R05A10.4 | Unknown function | 132 | 30.30b | 8.58E-04b |
| R13D7.2 | Unknown function | 101 | 10.63 | 3.07E-01 |
| F15D4.7 | Transposon | 96.7 | NF | |
| F52E1.2 | Similar to C-type lectin domain family | 91.1 | 11.15b | 4.26E-02b |
| C33G8.4 | Unknown function | 83.8 | 8.71 | 8.65E-02 |
| F07C6.3 | Unknown function | 83.6 | 20.29b | 1.51E-02b |
| R07A4.4 | Contains PAN-1 domain | 68.7 | 29.28b | 3.10E-04b |
| C08F11.13 | Unknown function | 68.2 | 3.65b | 1.05E-02b |
| tag-209 | Unknown function | 64.7 | 6.04 | 7.28E-01 |
| Y54G2A0.10 | Unknown function | 63.2 | 56.43b | 2.77E-04 |
| ZK822.4 | Unknown function | 61.8 | 15.35b | 3.53E-02 |
| vap-1 | Similar to venom allergen-like protein | 61.7 | 11.41b | 2.07E-02 |
| C44H4.11 | ncRNA | 58.6 | 0.06c | 4.05E-02c |
| R05A10.2 | Similar to yeast nucleolar protein NSR1 | 56.6 | 15.59b | 4.46E-04b |
| F35B12.9 | Unknown function | 55.7 | 26.41b | 9.81E-05b |
| Y69H2.3 | Similar to human IgGFc-binding protein | 53.4 | 0.93 | 6.59E-01 |
| Y23H5B0.3 | Unknown function | 52.8 | NF | |
| C05B5.9 | Pseudogene | 46.1 | 9.57b | 1.58E-02b |
| Y46B2A0.2 | redicted DNA-helicase | 44.3 | 2.29b | 5.00E-02b |
| F11C7.2 | Contains thrombospondin, Type 1 repeat domain | 43.6 | 20.85 | 4.01E-01 |
| F20A1.1 | Unknown function | 43.3 | 9.39b | 3.18E-02b |
| F59A7.2 | Unknown function | 38.7 | 4.91 | 4.68E-01 |
| K09B3.1 | Similar to mouse keratin-associated protein 6–2 | 37.3 | 8.27b | 3.34E-02b |
| Y69A2AR0.22 | Unknown function | 37.2 | 15.25b | 1.45E-02b |
| nas-32 | Astacin family zinc metalloprotease | 36.6 | NF | |
| Y38H6A0.3 | Contains cysteine-rich repeat domain | 35.8 | 9.11b | 3.28E-03b |
| K06A9.1 | Similar to human TCOF1 | 34.8 | 6.54b | 1.42E-02b |
| nas-31 | Astacin family zinc metalloprotease | 34.7 | 19.70b | 0.01373769b |
| F14D2.7 | Unknown function | 30.6 | NF | |
| K11E4.1 | Contains fungal lipase-like domain | 29.8 | 10.33b | 1.27E-03b |
| F35E2.5 | Similar to human MUCIN-2 | 28.6 | 0.22c | 3.36E-03c |
| F40F8.4 | Unknown function | 27.5 | 4.85 | 8.48E-02 |
| C25E10.11 | Unknown function | 26.9 | 6.21 | 5.78E-02 |
| ceh-37 | Homeobox protein | 26.3 | 12.53b | 2.27E-03b |
| Y105C5B0.5 | Unknown function | 25 | 0.25 | 1.49E-01 |
| F59A7.5 | Unknown function | 24.5 | 3.19b | 2.95E-02b |
| C56E10.3 | Similar to human myosin-18A | 24.2 | 3.67b | 2.14E-02b |
| B0285.6 | Putative sodium-coupled carboxylate transporter | 23.6 | 1.98 | 7.94E-01 |
| C56C10.4 | Ortholog of human FAM46 family | 23.5 | 13.53b | 1.02E-03b |
| C12D8.9 | Unknown function | 23.4 | 0.92 | 9.86E-01 |
| C05D12.1 | Ortholog of human ferric-chelate reductase 1 | 22.3 | 12.12b | 9.22E-03b |
| F13B6.3 | Similar to human mucin-5AC (fragment) | 21.4 | 0.86 | 9.11E-01 |
| tre-5 | Similar to human trehalase (brush-border membrane glycoprotein) | 20.8 | 2.59 | 4.70E-01 |
| F07F6.7 | Ortholog of human apolipoprotein L family | 20.5 | 1.44 | 3.44E-01 |
| K02E11.3 | Contains UDP-glucuronosyl/UDP-glucosyltransferase domain | 20.3 | 7.49b | 3.82E-02b |
| H22K11.11 | ncRNA | 20 | 1.91 | 6.71E-01 |
| K02E11.5 | Unknown function | 18.3 | 10.57 | 4.12E-01 |
| C41C4.16 | ncRNA | 18.3 | 0.68 | 4.27E-01 |
| C06E2.2 | Unknown function | 16.9 | 19.51 | 4.31E-01 |
| F16H6.10 | Involved in innate immune response. | 16.8 | 9.64b | 1.36E-04b |
| Y71G12B0.17 | Ortholog of human phosphatidylinositol transfer proteins | 16.5 | 4.86b | 4.47E-02b |
| Y39H10A0.1 | Unknown function | 14.9 | 11.06 | 1.54E-01 |
| T05C1.1 | Unknown function | 14.7 | 18.67b | 1.73E-03b |
| K02E11.4 | Contains UDP-glucuronosyl/UDP-glucosyltransferase domain | 14.6 | 0.18 | 1.84E-01 |
| Y73B6A0.3 | Contains UDP-glucuronosyl/UDP-glucosyltransferase domain | 14.6 | 39.55b | 2.20E-02b |
| F36H2.3 | Ortholog of human complement component receptor 2 | 14.5 | 5.00b | 6.30E-03b |
| cnp-3 | Unknown function | 13.5 | 12.87b | 9.78E-04b |
| M01G12.14 | Ortholog of human decapping exoribonuclease | 13.4 | 1.19 | 8.68E-01 |
| E02H9.3 | Unknown function | 13 | 1.01 | 8.39E-01 |
| C40H5.2 | Contains epidermal growth factor-like domain | 12.4 | 8.89b | 2.04E-02b |
| F49F1.7 | Similar to human MUCIN-2 | 12.3 | 0.20c | 9.22E-03c |
| H11L12.1 | Unknown function | 12.1 | 0.61 | 3.01E-01 |
| lec-9 | Predicted lectin | 12 | 34.88b | 6.41E-03b |
| F59E11.2 | Ortholog of human dehydrogenase/reductase member 1 | 12 | 7.39 | 1.39E-01 |
| hsp-70 | Heat shock protein | 11.8 | 0.68 | 2.85E-01 |
| daf-6 | Patched-related protein, required for amphid channel morphogenesis | 11.6 | 6.09b | 7.68E-03b |
| C27C7.1 | Unknown function | 11.5 | 0.87 | 5.73E-01 |
| nhr-158 | Nuclear hormone receptor | 11.5 | 13.55b | 9.44E-04b |
| F08G5.6 | CUB-like domain-containing, involved in innate immunity | 11.3 | 20.28b | 2.34E-04b |
| T19H12.3 | Contains UDP-glucuronosyl/UDP-glucosyltransferase domain | 11.3 | NF | |
| M03E7.2 | Ortholog of human prostaglandin E synthase 3 | 11.1 | 1.44 | 7.16E-01 |
| Y54F10BM0.3 | Ortholog of human (protein tyrosine phosphatase, nonreceptor Type 9) | 10.8 | 2.91 | 6.45E-01 |
| C38D9.2 | Unknown function | 10.6 | 0.57 | 7.94E-02 |
| F59D6.7 | Ortholog of human calcineurin-like EF-hand protein | 10.4 | 2.50b | 3.71E-02b |
| F59D12.3 | Contains sulfotransferase domain | 10.4 | 3.82 | 5.14E-01 |
| T13B5.9 | Ortholog of human LMLN metalloendopeptidase | 10.3 | 2.91 | 7.72E-01 |
| C25F9.2 | Probable DNA polymerase | 9.9 | 1.39 | 3.83E-01 |
| F10A3.16 | Contains 7TM GPCR, serpentine receptor class domain | 9.8 | 0.53 | 6.44E-01 |
| kcc-3 | Potassium/chloride transporter | 9.7 | 9.24b | 1.12E-02b |
| fkh-10 | Forkhead transcription factor | 9.7 | 0.77 | 4.66E-01 |
| lec-10 | Soluble galactose-binding lectin | 9.6 | 33.23b | 1.42E-03b |
| W06D11.3 | Similar to yeast EBNA1-binding protein | 9.6 | 2.06 | 7.51E-01 |
| C11H1.9 | Similar to humanSEC14-like protein 3 | 9.4 | 8.51b | 4.88E-02b |
| hsp-43 | Heat sock protein | 9.4 | 2.31 | 9.83E-02 |
| Y38H6C0.7 | Pseudogene | 9.3 | 2.20 | 1.39E-01 |
| ptc-2 | Similar to human isoform S of protein patched homolog 1 | 9.3 | 0.97 | 8.34E-01 |
| ceh-26 | Similar to human Prospero homeobox protein 1 | 9.3 | 3.93b | 5.93E-04b |
| K10C2.3 | Aspartyl protease | 9.3 | 2.21b | 1.06E-02b |
| C14F11.6 | Contains dTDP-4-dehydrorhamnose 3,5-epimerase domain | 9.1 | 0.85 | 9.96E-01 |
| T04A11.14 | Pseudogene | 9.1 | 0.15 | 1.24E-01 |
| Y55B1BL0.1 | Unknown function | 9.1 | 2.78 | 9.06E-01 |
| rdy-2 | Involved in regulation of amount of matrix material secreted by sheath cells | 9.1 | 3.13 | 7.41E-01 |
| pqn-8 | Predicted prion-like-(Q/N-rich)- domain-bearing protein | 8.9 | 4.53b | 3.05E-02b |
| C38D9.5 | Pseudogene | 8.9 | 2.01 | 6.90E-01 |
| C56C10.6 | Ortholog of human tau tubulin kinase family | 8.8 | 2.97b | 1.86E-02b |
| gba-1 | Ortholog of human GBA (glucosidase, beta, acid) | 8.5 | 4.92 | 5.55E-01 |
| clec-174 | Similar to human MUCIN-2 | 8.4 | 0.31 | 8.20E-02 |
| R05D7.5 | Contains cytosolic motility protein domain | 8.3 | 13.09b | 8.77E-03b |
| lipl-6 | Ortholog of human lipase family | 8.2 | 17.11b | 1.01E-02b |
| Y6E2A0.4 | Unknown function | 8.1 | 9.27 | 7.07E-01 |
| deps-1 | P-granule-associated protein involved in germline development | 8 | 0.10 | 5.43E-02 |
| Y110A2AL0.4 | Unknown function | 8 | 0.41 | 2.89E-01 |
| F32B5.4 | Unknown function | 8 | 1.09 | 5.91E-01 |
| col-111 | Structural constituent of cuticle | 7.9 | 0.57 | 2.98E-01 |
| Y69H2.10 | Unknown function | 7.9 | 0.62 | 3.05E-01 |
| C05B5.8 | Unknown function | 7.8 | 21.07b | 2.29E-03b |
| bath-29 | Similar to human Kelch repeat and BTB domain-containing protein 2 | 7.8 | 0.32 | 8.44E-02 |
| T13C2.2 | Unknown function | 7.6 | 5.22b | 1.10E-02b |
| C17C3.5 | Unknown function | 7.6 | 2.02 | 3.72E-01 |
| R09H3.3 | Unknown function | 7.5 | 0.83 | 3.86E-01 |
| W09B6.5 | Unknown function | 7.4 | 1.14 | 5.73E-01 |
| ZC449.2 | Contains PAN-1 domain | 7.4 | 1.37 | 8.21E-01 |
| cyp-33A1 | Similar to human cytochrome P450 2C9 | 7.4 | 4.23 | 7.58E-02 |
| C17E7.9 | Unknown function | 7.3 | 4.88 | 3.65E-01 |
| rnh-1.3 | RNase H ribonuclease | 7.3 | 9.96 | 1.33E-01 |
| Y105C5A0.25 | Pseudogene | 7.3 | 2.75 | 6.78E-01 |
| F59H6.5 | Putative DNA helicase | 7.3 | 2.10 | 1.35E-01 |
| C34D4.10 | Similar to human glycosyltransferase MGAT1 | 7.2 | 1.08 | 8.97E-01 |
| C49A9.4 | Ortholog of human cystatin B | 7.1 | 22.24b | 9.54E-03b |
| kca-1 | Kinesin cargo adaptor | 7.1 | 0.45 | 3.11E-01 |
| T04G9.7 | Unknown function | 7.1 | NF | |
| tdo-2 | Tryptophan 2,3-dioxygenase | 7 | 2.55 | 1.08E-01 |
| Y38H6C0.8 | Ortholog of human regenerating islet-derived (REG) family | 7 | 2.14 | 3.28E-01 |
| T14G8.4 | Unknown function | 7 | 1.53 | 6.18E-01 |
| F59B1.2 | Unknown function | 7 | 7.39b | 3.78E-03b |
| inft-1 | Similar to human FH2 domain-containing protein 1 | 7 | 3.62b | 7.03E-03b |
| Y65B4BR0.8 | Ortholog of human DNA replication complex protein GINS3 | 6.8 | 0.07 | 8.76E-03 |
| nspe-3 | Unknown function | 6.8 | 10.79 | 4.84E-01 |
| dmd-3 | DNA-binding Zn finger DM domain transcription factor | 6.8 | 0.03 | 5.22E-03 |
| F40G12.5 | Unknown function | 6.7 | 9.19 | 3.44E-01 |
| T05F1.7 | Similar to yeast vesicle-mediated ER to Golgi transport protein USO1 | 6.7 | 1.65 | 9.36E-01 |
| F20A1.10 | Unknown function | 6.7 | 2.12 | 2.12E-01 |
| F53A9.8 | Involved in defense response to Gram-positive bacterium | 6.7 | 33.73b | 2.15E-03b |
| gly-5 | UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase | 6.7 | 1.58 | 1.22E-01 |
| zip-10 | bZIP transcription factor, involved in innate immune response | 6.7 | 172.52b | 2.59E-03b |
| Y57G7A0.5 | Unknown function | 6.7 | 0.85 | 4.83E-01 |
| F20A1.9 | Similar to human ATP-dependent RNA helicase DDX1 | 6.6 | 2.15 | 2.59E-01 |
| T16G1.5 | Predicted transferase | 6.5 | 0.61 | 3.67E-01 |
| fbxa-197 | Unknown function | 6.5 | 1.24 | 8.20E-01 |
| C17H12.12 | Contains BTB/POZ domain | 6.5 | 0.14c | 1.98E-02c |
| col-63 | Similar to human collagen alpha-1(I) chain | 6.5 | 0.10c | 2.72E-02c |
| T05E11.8 | Unknown function | 6.5 | 1.19 | 9.34E-01 |
| C04B4.2 | Unknown function | 6.3 | 5.60b | 7.10E-04b |
| H06H21.11 | Unknown function | 6.3 | 2.35b | 2.30E-03b |
| glr-2 | AMPA-type ionotropic glutamate receptor subunit | 6.3 | 0.85 | 0.50002708 |
| unc-25 | GABA neurotransmitter biosynthetic enzyme, glutamic acid decarboxylase | 6.3 | 0.43 | 2.69E-01 |
| Y43F8B0.9 | Unknown function | 6.3 | 3.26b | 4.02E-02b |
| glh-1 | Putative DEAD-box RNA helicase | 6.2 | 0.19 | 8.43E-02 |
| F26A1.9 | Unknown function | 6.2 | 2.05 | 9.94E-01 |
| Y39A3B0.3 | Unknown function | 6.2 | 0.95 | 6.50E-01 |
| C05D2.8 | Unknown function | 6.2 | 9.69b | 1.99E-02b |
| B0034.4 | Similar to O. cuniculus triadin, Involved in regulation of ER Ca2+ release | 6.1 | 0.05c | 5.66E-03c |
| inx-13 | Innexin channel | 6 | 1.37 | 7.82E-01 |
| ifb-1 | Essential intermediate filament protein | 6 | 3.21b | 1.94E-02b |
| F14B4.1 | Ortholog of human low density lipoprotein receptor-related protein family | 6 | 0.38 | 3.22E-02 |
| cbd-1 | Contains chitin-binding peritrophin-A domains | 5.9 | 0.28 | 8.27E-02 |
| eak-4 | Acts in parallel to akt-1 to regulate insulin-like signaling | 5.9 | 0.53 | 3.38E-01 |
| zig-3 | Member of the immunoglobulin superfamily of proteins | 5.8 | 3.39b | 1.54E-02b |
| srx-11 | Pseudogene | 5.8 | 0.44 | 2.46E-01 |
| ptr-11 | Member of the sterol sensing domain protein family | 5.7 | 2.45 | 1.12E-01 |
| M01G12.9 | Ortholog of human decapping exoribonuclease | 5.7 | 1.96b | 5.89E-03b |
| itr-1 | Putative inositol (1,4,5) trisphosphate receptor | 5.7 | 4.17b | 1.30E-02b |
| gly-6 | Ortholog of human polypeptide N-acetylgalactosaminyltransferase | 5.7 | 1.35 | 1.54E-01 |
| R09H3.2 | Unknown function | 5.7 | 15.78 | 7.94E-01 |
| rrn-3.56 | Pseudogene | 5.6 | NF | |
| F47C12.8 | Unknown function | 5.6 | 3.34b | 4.68E-02b |
| hpk-1 | Predicted homeodomain interacting protein kinase | 5.6 | 0.92 | 6.29E-01 |
| nhr-247 | Predicted nuclear hormone receptor | 5.6 | 6.29b | 5.70E-03b |
| F57A8.1 | Unknown function | 5.5 | 0.42 | 1.47E-01 |
| kbp-4 | Kinetochore null binding protein, involved in reproduction | 5.5 | 0.82 | 4.11E-01 |
| Y67A10A0.9 | Homologous to integral membrane protein claudin | 5.5 | 2.24 | 8.36E-02 |
| bath-12 | pseudogene | 5.5 | 4.89 | 6.57E-02 |
| T08G5.3 | Unknown function | 5.5 | 4.95 | 9.56E-01 |
| mnk-1 | Ortholog of the Mnk MAP kinase-interacting kinase | 5.5 | 0.55c | 1.81E-02c |
| F21H7.2 | Similar to human high mobility group nucleosome-binding domain-containing protein 5 | 5.4 | 11.93b | 2.96E-03b |
| ZK669.5 | Contains small GTPase superfamily domain | 5.4 | 3.10 | 9.55E-01 |
| C39B5.2 | Unknown function | 5.4 | 1.37 | 4.88E-01 |
| nspe-7 | Unknown function | 5.4 | 0.30 | 2.41E-01 |
| C05D10.4 | Unknown function | 5.4 | 4.70b | 2.09E-02b |
| F35E12.6 | CUB domain containing protein involved in innate immunity | 5.3 | 2.47 | 1.59E-01 |
| hsp-16.41 | Heat shock protein | 5.3 | 1.21 | 7.63E-01 |
| kin-6 | Predicted tyrosine protein kinase | 5.3 | 0.33 | 2.41E-01 |
| nhr-90 | Nuclear hormone receptor | 5.3 | 6.87b | 2.45E-02b |
| Y59E1B0.1 | Unknown function | 5.3 | 4.34 | 1.53E-01 |
| ttr-43 | Contains transthyretin-like domain | 5.3 | 12.06 | 5.16E-02 |
| duox-2 | Similar to human isoform 1 of dual oxidase 1 | 5.3 | 1.20 | 7.87E-01 |
| C01B10.3 | Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase | 5.3 | 3.24b | 2.17E-02b |
| W03A5.4 | Similar to human disks large-associated protein 1 | 5.2 | 4.33b | 2.80E-02b |
| F49C5.8 | Transposon | 5.2 | NF | |
| Y75B12B0.3 | Unknown function | 5.2 | 1.59 | 2.46E-01 |
| F17C8.5 | TWK potassium channel subunit | 5.2 | NF | |
| nhr-204 | Nuclear hormone receptor | 5.2 | 2.45 | 4.68E-01 |
| rab-11.2 | Ortholog of human RAB11 small GTPase family | 5.2 | 13.36b | 1.83E-03b |
| mua-3 | Similar to human fibrillin-1 | 5.1 | 0.43c | 1.05E-02c |
| lec-8 | Galectin family member | 5.1 | 40.08b | 3.55E-04b |
| F40F9.3 | Contains PDZ domain found in signaling proteins | 5.1 | 2.66 | 2.78E-01 |
| pgp-8 | Member of the P-glycoprotein subclass of the ATP-binding cassette transporter superfamily | 5.1 | 1.29b | 4.13E-02b |
| ZK355.5 | Insulin/EGF-receptor L domain protein | 5 | NF | |
| F25H5.8 | Similar to yeast vacuolar intralumenal vesicle intergral membrane protein SNA3 | 5 | 9.30 | 1.08E-01 |
| twk-45 | Ortholog of human KCNK potassium channels | 5 | 0.12 | 8.84E-02 |
| K04H4.2 | Predicted secreted chitin binding domain containing protein | 5 | 0.50c | 1.38E-02c |
| fbxa-170 | Contains protein-protein interaction mediating F-box domain | 5 | 3.71b | 1.07E-02b |
| R10H10.4 | Unknown function | 5 | 1.59 | 5.58E-01 |
| Y57G11C0.31 | Contains nucleotide-diphospho-sugar transferase | 5 | 1.39 | 2.53E-01 |
| hlh-3 | Helix-loop-helix transcription factor | 4.9 | 12.70b | 6.59E-03b |
| srt-42 | 7TM GPCR, serpentine receptor Class T | 4.9 | 0.62 | 2.47E-01 |
| W02D7.3 | Unknown function | 4.9 | 22.87b | 4.85E-03b |
| R03H10.6 | Ortholog of human replication protein A1 | 4.8 | 1.86b | 3.80E-02b |
| sri-43 | 7TM GPCR, serpentine chemoreceptor Class I | 4.8 | 0.41 | 3.18E-01 |
| ZK470.12 | ncRNA | 4.8 | 11.78 | 3.77E-01 |
| ifa-4 | Intermediate filament protein | 4.8 | 12.22b | 6.66E-03b |
| T28F4.6 | Unknown function | 4.8 | 1.84 | 2.28E-01 |
| T25F10.3 | Contains epidermal growth factor-like domain | 4.8 | 3.34b | 6.16E-03b |
| inx-12 | Innexin channel | 4.8 | 1.57 | 1.59E-01 |
| such-1 | Component of the anaphase promoting complex/cyclosome | 4.8 | 0.22c | 3.48E-02c |
| itx-1 | Member of neurexin superfamily | 4.8 | 3.37b | 8.07E-03b |
| F55D1.2 | Unknown function | 4.7 | 0.99 | 9.61E-01 |
| B0281.4 | Ortholog of several human BTB/POZ domain-containing proteins | 4.7 | 0.59 | 2.92E-01 |
| gei-17 | SUMO E3 protein ligase | 4.7 | 1.19 | 2.19E-01 |
| F30F8.10 | Ortholog of human (N(alpha)-acetyltransferase 60 | 4.7 | 0.56 | 2.83E-01 |
| ugt-45 | Ortholog of human UDP glycosyltransferase 3 family | 4.7 | 4.17 | 6.22E-02 |
| apm-1 | Similar to human AP-1 complex subunit mu-1 | 4.7 | 3.40b | 3.51E-03b |
| magu-2 | Similar to the human membrane-associated guanylate kinase family | 4.7 | 2.00 | 5.50E-02 |
| nspd-4 | Unknown function | 4.6 | 0.30 | 1.94E-01 |
| F20A1.6 | Unknown function | 4.6 | 2.79 | 1.83E-01 |
| ceh-27 | NK-2 class homeodomain protein | 4.6 | 0.59 | 2.02E-01 |
| C03G6.17 | Contains acyl-CoA N-acyltransferase domain | 4.6 | 1.22 | 9.26E-01 |
| C24H12.5 | Ortholog of human downstream neighbor of SON | 4.6 | 0.04c | 1.52E-04c |
| D1086.3 | Unknown function | 4.6 | 1.30 | 4.79E-01 |
| T19D7.5 | Unknown function | 4.6 | 0.17 | 1.34E-01 |
| Y42G9A0.2 | Unknown function | 4.5 | NF | |
| cysl-3 | Ortholog of human cystathionine-beta-synthase | 4.5 | 2.14 | 3.89E-01 |
| ins-37 | Insulin-like peptide | 4.5 | 0.13 | 9.41E-02 |
| fbxa-211 | Contains protein-protein interaction mediating F-box domain | 4.5 | 1.49 | 2.19E-01 |
| clec-216 | Contains C-type lectin-like domain | 4.5 | 0.39 | 2.31E-01 |
| clec-223 | Contains C-type lectin-like domain | 4.5 | 5.85b | 4.23E-02b |
| fasn-1 | Fatty acid synthase | 4.5 | 0.83 | 5.48E-01 |
| srv-15 | 7TM GPCR, serpentine receptor Class V | 4.5 | 0.04c | 9.94E-04c |
| C28C12.4 | Similar to yeast GAR1, which is involved in modification and cleavage of 18S pre-rRNA | 4.5 | 9.96 | 1.05E-01 |
| tyr-4 | Similar to human tyrosinase | 4.4 | 2.33 | 8.57E-02 |
| C16B8.3 | Similar to yeast RNA-binding protein NAB3 | 4.4 | 21.97b | 2.31E-03b |
| pat-12 | Similar to mouse serine/arginine repetitive matrix protein 2 | 4.4 | 2.60b | 7.04E-03b |
| T10E9.3 | Similar to yeast GPI-anchored cell surface glycoprotein (flocculin) | 4.4 | 1.80b | 1.71E-02b |
| nsy-4 | Member of PMP22/EMP/claudin/calcium channel gamma subunit family | 4.4 | 3.69b | 4.00E-02b |
| C27B7.5 | Predicted nucleic acid and zinc ion binding activity | 4.4 | 0.87 | 7.46E-01 |
| F36H5.10 | Unknown function | 4.4 | 0.07c | 4.62E-02c |
| ceh-32 | Six/sine oculis-type homeodomain protein | 4.4 | 0.64 | 2.05E-01 |
| F56H6.2 | Unknown function | 4.4 | 0.09c | 3.92E-04c |
| C01B7.5 | PDZ domain-containing protein | 4.4 | 0.30c | 2.09E-02c |
| sek-1 | Encodes a mitogen-activated protein kinase kinase | 4.4 | 3.75b | 1.57E-03b |
| gei-14 | Similar to human cylicin-1 | 4.4 | 0.48 | 2.75E-01 |
| C06A8.3 | Similar to O. volvulus Ov17 hypodermal antigen | 4.4 | 1.07 | 8.38E-01 |
| H08J19.1 | Unknown function | 4.3 | 0.67 | 2.83E-01 |
| T01D1.1 | Declared dead | 4.3 | NF | |
| lec-11 | Galectin family member | 4.3 | 20.86b | 6.74E-05b |
| B0353.1 | Similar to yeast GPI-anchored cell surface glycoprotein (flocculin) | 4.3 | 8.14b | 1.83E-03b |
| Y50D4B0.2 | Ortholog of human saccharopine dehydrogenase | 4.3 | 0.57 | 3.98E-01 |
| F21A9.2 | Contains zinc finger, C2H2-like domain | 4.3 | 1.57 | 5.97E-01 |
| F52H3.5 | Ortholog of human tetratricopeptide repeat domain 36 | 4.3 | 5.72 | 2.68E-01 |
| lfe-2 | Inositol (1,4,5) triphosphate-3-kinase | 4.3 | 4.37b | 6.55E-03b |
| Y22D7AR0.3 | Unknown function | 4.3 | 0.07 | 1.89E-01 |
| fbxa-140 | Contains protein-protein interaction mediating F-box domain | 4.3 | 2.35 | 2.54E-01 |
| vps-4 | Predicted ATP binding protein | 4.3 | 1.22 | 5.67E-01 |
| dnj-12 | Similar to human DnaJ homolog subfamily A member 1 | 4.2 | 1.00 | 8.91E-01 |
| hsp-16.2 | Heat shock protein | 4.2 | 1.17 | 8.44E-01 |
| F26A1.3 | Predicted protein kinase and ATP binding protein | 4.2 | 3.20 | 6.93E-01 |
| crh-2 | Predicted DNA binding transcription factor activity | 4.2 | 2.54b | 9.33E-03b |
| ZC239.2 | Contains potassium channel tetramerization-type BTB domain | 4.2 | 0.40 | 2.27E-01 |
| gst-36 | Similar to yeast RNA-binding protein NAB3 | 4.2 | 7.06b | 4.02E-03b |
| Y55B1AL0.1 | Similar to mouse serine/arginine repetitive matrix protein 2 | 4.2 | 7.23b | 4.45E-04b |
| C33C12.4 | Similar to yeast GPI-anchored cell surface glycoprotein (flocculin) | 4.2 | NF | |
| ram-2 | Member of PMP22/EMP/claudin/calcium channel gamma subunit family | 4.2 | 0.20 | 1.49E-01 |
| C04F12.11 | Predicted nucleic acid and zinc ion binding activity | 4.2 | NF | |
| rps-20 | Unknown function | 4.1 | 0.94 | 6.47E-01 |
| tts-1 | Six/sine oculis-type homeodomain protein | 4.1 | 22.99b | 5.39E-04b |
| F19B10.10 | Unknown function | 4.1 | 1.40 | 2.19E-01 |
| C17G1.5 | PDZ domain-containing protein | 4.1 | 3.37b | 1.98E-03b |
| ser-2 | Encodes a mitogen-activated protein kinase kinase | 4.1 | 0.98 | 4.77E-01 |
| F53A9.6 | Similar to human cylicin-1 | 4.1 | 46.43b | 3.80E-03b |
| C30G12.6 | Similar to O. volvulus Ov17 hypodermal antigen | 4.1 | 1.09 | 7.32E-01 |
| F31A3.3 | Unknown function | 4.1 | 23.69b | 4.63E-03b |
| K09F6.6 | Declared dead | 4.1 | 0.90 | 5.93E-01 |
| F54E7.6 | Galectin family member | 4 | 0.50 | 3.38E-01 |
| H25P19.1 | Similar to yeast GPI-anchored cell surface glycoprotein (flocculin) | 4 | 1.06 | 8.97E-01 |
| nhr-145 | Ortholog of human saccharopine dehydrogenase | 4 | 0.17 | 7.86E-02 |
| ttr-9 | Contains zinc finger, C2H2-like domain | 4 | 0.07c | 3.80E-03c |
| rom-2 | Ortholog of human tetratricopeptide repeat domain 36 | 4 | 8.30b | 1.78E-03b |
| eps-8 | Inositol (1,4,5) triphosphate-3-kinase | 4 | 4.49b | 3.84E-03b |
| R07B7.10 | Unknown function | 4 | 1.17 | 6.40E-01 |
| dct-18 | Contains protein-protein interaction mediating F-box domain | 4 | 7.23b | 3.96E-02b |
| ptc-1 | Predicted ATP binding protein | 4 | 1.20 | 3.65E-01 |
aRNAseq fold enrichment and p values for transcripts enriched ≥4-fold from Bacaj et al. (2008) microarray analysis. NF, Transcript not found in RNAseq data. Gene descriptions were derived from Wormbase (www.wormbase.org).
bValues from transcripts significantly enriched in RNAseq.
cValues from transcripts significantly depleted.