Table 2.
Lhoba compared with the11 HapMap populations after Bonferroni’s multiple adjustment
| SNP | ASW | CEU | CHB | CHD | GIH | JPT | LWK | MEX | MKK | TSI | YRI |
|---|---|---|---|---|---|---|---|---|---|---|---|
| rs10264272 | / | / | / | / | / | / | 1.445E-12 | / | 8.823E-08 | / | 8.95E-09 |
| rs1042713 | 0.6380937 | 0.0044716 | 0.5270236 | 0.444125 | 0.1707646 | 0.2674132 | 0.772293 | 0.5414963 | 0.811307 | 0.0016608 | 0.3529788 |
| rs1042714 | / | 6.805E-08 | 0.6277193 | / | / | 0.1785214 | / | / | / | / | 0.5692257 |
| rs1045642 | 1.001E-05 | 0.1065589 | 0.0577659 | 0.0802092 | 0.0280032 | 0.9051566 | / | 0.9568834 | 5.145E-13 | 0.6065329 | 5.413E-15 |
| rs1051266 | 0.0043283 | 6.895E-06 | 0.0063808 | 0.0003241 | 7.061E-07 | 0.1000146 | 0.2811009 | 8.062E-07 | 0.042643 | 0.000215 | 0.4522463 |
| rs1065776 | / | / | / | / | / | / | / | / | / | / | / |
| rs10929302 | / | 6.513E-06 | 0.5364754 | / | / | 0.5128563 | / | / | / | / | 3.074E-08 |
| rs1128503 | 6.812E-16 | 6.961E-08 | 0.6064446 | 0.6460303 | 0.0325144 | 0.0187387 | 3.476E-25 | 4.099E-05 | 6.934E-28 | 1.293E-07 | 3.563E-27 |
| rs1142345 | / | / | / | / | / | / | 0.0004143 | 0.0312395 | / | / | 0.2549644 |
| rs1229984 | / | 0.0289084 | 7.297E-23 | / | / | 2.618E-22 | / | / | / | / | 0.0306175 |
| rs12720441 | / | / | / | / | / | / | / | / | / | / | / |
| rs12721634 | / | / | / | / | / | / | / | / | / | / | / |
| rs1540339 | 1.703E-11 | 4.77E-10 | 0.6820561 | 0.4519886 | 8.313E-10 | 0.8053552 | 3.919E-21 | 4.041E-06 | 3.041E-23 | 1.172E-09 | 3.378E-19 |
| rs1544410 | 5.43E-05 | 2.932E-14 | 0.4616421 | 0.4491027 | 2.135E-14 | 0.060301 | 8.076E-06 | 0.0001279 | 4.388E-12 | 6.733E-13 | 1.573E-07 |
| rs1695 | 4.163E-10 | 7.76E-12 | 0.0563114 | 0.0184164 | 6.755E-07 | 0.886209 | 3.546E-16 | 1.97E-12 | 5.743E-09 | 6.537E-06 | 3.281E-10 |
| rs17238540 | / | / | / | / | / | / | / | / | / | / | / |
| rs17244841 | / | / | / | / | / | / | / | / | / | / | / |
| rs1799853 | / | / | / | / | / | / | / | / | / | / | / |
| rs1800460 | / | / | / | / | / | / | / | / | / | / | / |
| rs1800497 | 0.0082188 | 0.3206538 | 0.0010863 | 0.0002928 | 0.3810381 | 0.002664 | 0.0272732 | 0.0074558 | 0.0215364 | 0.6832066 | 0.0009302 |
| rs1800888 | / | / | / | / | / | / | / | / | / | / | / |
| rs1801030 | / | / | / | / | / | / | / | / | / | / | / |
| rs1801131 | 0.0910937 | 0.6534614 | 0.1965392 | 0.0670376 | 0.1433041 | 0.0333442 | 0.0275723 | 0.2363873 | 0.4899573 | 0.3715165 | 1.416E-05 |
| rs1801133 | 0.0010973 | 0.1472415 | 6.751E-06 | 0.0451049 | 0.3713918 | 0.0159539 | 0.0009765 | 0.002124 | 4.855E-05 | 2.086E-05 | 0.0004851 |
| rs1801252 | / | / | 0.0011173 | / | / | 0.001287 | / | / | / | / | 0.0006274 |
| rs1801253 | / | 0.1442617 | 0.4732605 | / | / | 0.4736514 | / | / | / | / | 0.0008045 |
| rs1801272 | / | 9.854E-34 | 5.38E-32 | / | / | 9.095E-31 | / | / | / | / | 1.805E-35 |
| rs1805124 | 0.0032287 | 0.1268706 | / | / | 0.0849444 | / | 0.0002433 | 0.3269952 | 1.05E-07 | 0.0057815 | 9.724E-06 |
| rs2032582 | / | / | / | / | / | / | / | / | / | / | / |
| rs20417 | / | 1.167E-29 | 2.058E-29 | / | / | 3.392E-29 | / | / | / | / | 3.207E-24 |
| rs2046934 | / | 0.8499027 | 0.9614884 | / | / | 0.8712248 | / | / | / | / | 0.6454923 |
| rs2066702 | 1.065E-10 | / | / | / | / | / | 4.081E-07 | / | / | / | 5.646E-15 |
| rs2066853 | 0.0141483 | 0.0004519 | 0.0011956 | 0.0048595 | 0.0023018 | 2.2E-05 | 1.45E-06 | 0.0472198 | 0.0013065 | 0.0003466 | 3.642E-05 |
| rs2228570 | / | / | / | / | / | / | / | / | / | / | / |
| rs2239179 | 0.0019673 | 3.597E-07 | 0.2087307 | 0.6354083 | 6.432E-09 | 0.6468278 | 0.0010861 | 0.0869567 | 9.07E-08 | 3.708E-06 | 0.0159804 |
| rs2239185 | / | / | 0.4685249 | / | / | 0.2766129 | / | / | / | / | 0.0172396 |
| rs2740574 | / | / | / | / | / | / | / | / | / | / | / |
| rs28371706 | / | / | / | / | / | / | / | / | / | / | / |
| rs28371725 | / | / | / | / | / | / | / | / | / | / | / |
| rs28399433 | / | / | / | / | / | / | / | / | / | / | / |
| rs28399444 | / | / | / | / | / | / | / | / | / | / | / |
| rs28399454 | / | / | / | / | / | / | / | / | / | / | / |
| rs28399499 | 0.0003479 | / | / | / | / | / | / | / | 0.1678005 | / | 2.037E-06 |
| rs3211371 | / | / | / | / | / | / | / | / | / | / | / |
| rs3745274 | 0.0210484 | 0.0147724 | 0.8048011 | 0.9542118 | 7.743E-07 | 0.603502 | 0.0012926 | 0.0102078 | 1.156E-06 | 0.0094913 | 6.105E-08 |
| rs3782905 | / | 2.278E-19 | 2.913E-21 | / | / | 7.343E-25 | / | / | / | / | 1.07E-22 |
| rs3807375 | 0.7813935 | 1.863E-11 | 0.7706129 | 0.9413499 | 4.484E-10 | 0.081591 | 0.0162642 | 0.0206186 | 0.9907614 | 1.658E-11 | 0.2726303 |
| rs3814055 | 2.4E-05 | 1.382E-07 | 5.46E-05 | 0.0006412 | 3.023E-11 | 0.0001352 | 2.845E-05 | 6.538E-05 | 0.0015888 | 2.053E-09 | 2.662E-05 |
| rs3815459 | / | / | 0.0007393 | / | / | 1.5E-06 | / | / | / | / | 0.1291254 |
| rs3846662 | 5.804E-09 | 0.1248809 | 0.825542 | 0.6531327 | 0.0221528 | 0.8459821 | 2.521E-20 | 0.0480714 | 5.189E-13 | 0.3144964 | 4.179E-22 |
| rs3918290 | / | / | / | / | / | / | / | / | / | / | / |
| rs4124874 | 3.298E-19 | 1.126E-08 | 0.0017157 | 0.0003381 | 2.688E-16 | 0.0010809 | 5.565E-30 | 2.673E-08 | 5.62E-33 | 2.929E-07 | 7.398E-35 |
| rs4148323 | / | 6.646E-13 | 0.0003685 | 0.0001079 | 2.382E-14 | 1.467E-06 | / | 7.694E-09 | / | / | 6.646E-13 |
| rs4149056 | 0.3727746 | 0.000974 | 0.002254 | 0.0263308 | / | 0.0638509 | / | / | 0.0257473 | 3.261E-06 | / |
| rs4244285 | / | 0.0151862 | 0.1531883 | / | / | 0.9912602 | / | / | / | / | 0.0136854 |
| rs4986893 | / | / | / | / | / | / | / | / | / | / | / |
| rs4986910 | / | / | / | / | / | / | / | / | / | / | / |
| rs4986913 | / | / | / | / | / | / | / | / | / | / | / |
| rs5030656 | / | / | / | / | / | / | / | / | / | / | / |
| rs5219 | / | / | / | / | / | / | / | / | / | / | / |
| rs59421388 | / | / | / | / | / | / | / | / | / | / | / |
| rs6025 | / | 0.1646743 | / | / | / | / | / | / | / | / | / |
| rs61736512 | / | / | / | / | / | / | / | / | / | / | / |
| rs6277 | / | 1.54E-26 | / | / | / | / | / | / | / | / | / |
| rs6791924 | / | / | / | / | / | / | / | / | / | / | / |
| rs689466 | 3.389E-08 | 1.522E-08 | 0.534223 | 0.6954382 | 1.963E-08 | 0.214661 | 1.783E-17 | 0.005605 | 4.43E-24 | 4.283E-07 | 7.182E-14 |
| rs698 | 0.2472551 | 3.218E-13 | 0.1091256 | 0.3145579 | 0.0027601 | 0.2195671 | 0.4639062 | 0.0115411 | 0.0084764 | 0.0001312 | 0.1139771 |
| rs701265 | 6.476E-16 | 0.301935 | 0.0005385 | 0.0151595 | 0.0445677 | 0.0055455 | 6.36E-27 | 0.34792 | 1.494E-30 | 0.3207243 | 1.784E-29 |
| rs7294 | 1.998E-16 | 2.767E-13 | 0.612706 | 0.3582965 | 1.542E-31 | 0.0691227 | 5.411E-17 | 6.888E-09 | 5.207E-21 | 8.073E-12 | 2.356E-21 |
| rs7626962 | / | / | / | / | / | / | / | / | / | / | 0.0012409 |
| rs776746 | 3.516E-12 | 5.209E-06 | 0.0524418 | 0.5040015 | 0.4270217 | 0.1157965 | 7.21E-27 | 0.2287979 | 3.231E-11 | 0.0003761 | 4.227E-29 |
| rs7975232 | 0.0002258 | 0.0009613 | 0.3768935 | 0.2806556 | 0.0085925 | 0.6861881 | 1.387E-09 | 0.0949649 | 3.44E-09 | 0.0003739 | 4.224E-06 |
| rs975833 | / | 0.0756969 | 1.535E-09 | / | / | 6.723E-08 | / | / | / | / | 0.0474908 |
| rs9934438 | 8.943E-27 | 3.766E-24 | 0.612706 | 0.4507347 | 1.051E-33 | 0.0738706 | 8.196E-37 | 2.08E-16 | 2.051E-43 | 6.33E-20 | 2.593E-43 |
p value <0.05/(74×11) indicates statistical significance.